Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03038 ATGGAGGAGCCTCAGTACCGCGAACATCCCAAAACCAAAATCGCCACCATTCCGCCGCCGCAGCCGCCGCACTCCGACGGCGCCACCCCCGAATTGCGCGGCGTGGATTGCAACCTTGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCGGGTTCCTTCTCCGATATCGTCGTCAATGCCATGGGTTCCACTTATCACCTTCATCGGCTTATCCTCTCTCGCAGTTCGTATTTCAGGAACATGCTTCACGGGCCTTGGAAAGAAGCCAGTGCTCCTGTTGTGACTCTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGTCTTTGGCATATCTATATGGGCAACACCCTAAGCTTAACGATAATAATGCATTCCGGGTTCTTGCTGCTGCTTCCTTCCTTGACCTTCAGGACTTATGTGGAATTTGTACAGATTTCATTATATCTGAGCTCTGGACTTCAAACTTCTTGGCTTATCAGGTATTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGCTGGGGCTACCTTTGTCAAAGTGGTGGCATGGAATTGAGAGAGGTGCTTCCTAAACTTTCATCGCAAACATTACATGCATTGCTGACTTCTAATGATCTGTGGATACCCAATGAAGAGACTCGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAGGTGCTCATTGCAAGGTTGAACATCCCGTGCATGGAATTTCTGGTTCTGAGTCTGCTACTGGTATTCATTCTGATTTTATTAATGGCAAGGGAAAAAGTGTAATAGATAGCTGCACTGCTAAGAGGTTGGAAACTGACGTGGGGAAAATGAGTCTTAAAAGTGATCTAAAGGATCCTAGCACTCCAAGTCTTCTAGTTGAGCTTGCAGATCCAGTGGCAGACTTCAATGATGGGGTTTCGGTTTCCAATGAACGGGTTCAACAATCTTCGTATGTCAGTTCACCAAACTTGAATCCAAGATATACGTGTGACATGGAAGGACCATCATTGGGAAATTCGTTGCCTGATACAGATGGGATGAGAACACCGTGTTATGTCGAGATGCCTCTTGGTACTGGAGCAACTGCTATGGGAGCCCCTGGAGTCGGTATTGAAGGGCCATCTGAAGAAGGACCTTGTTACCATTTGGAGAACAACAGTTGGTTAGTTAGGGATCAATCAAGACATTGCTTTTCATCAAATTCTTGTAATGAGCTCACATCCAGTGATTGGGGAAGATATGGAGCACCTTTTATATCTTGGAATGGCCAAGTTGTTGGCAGAAAGCTTAACGCTCACCCCAGAGGAAACTTCAGAGGCCATGGAGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCTCTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTCAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAGGAAATTGCTGCTGATACATGCAAAGTTTGCTCCCTTATGAATTGCACTTGTCAGAAGCAATTTACGTTTTCACATGGAGCTTCTACAACTGGATCTTACATGCAAGAACATAATCAGAACATTATGCCTGGAAGTGCGGGAAACATATATGTTGCTGAATCTTCTGCGGGTGAAAGAAATGGCACTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGACTTGCAGGTATTGGCCGTGGAACTACTTTTGTTCCAGCATCAGCTTCGGCTCCTACACGTGTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAACTATCCTCAGTCTGCAGCAAATGATGATTCTGAGACACGTGCTGACCCCAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTAGTCGGGTTAAGCCTGGGAGGGAGTAATGGAACAAATGTACATACAGACCTAACACAAAGGGGATATGAAATGGGCATGCAAAGCAGCATGTCTGGAAGTACTTCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCAGAAAATACAATTGGTATAGATTGGGACAATGTCAACAGTACTTCTATATCACTGGATATGAAAACACCTTTAAGCCATTTCCCCCCTTTCCGCTTTGGAGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCTCCAGGGGCGGCGAACCCTTGGGTTGTTTCTTCATCGTCGGAAAGCAGAGATAACTGATATACATAGGAAGGTGCACATGTATGTTGACTCACGTGAAAAGGTGACTGCACGCTACCAGTTGACTGTTCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACACTTCTACCTAAAGCTCCCAAGGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTATGA 2604 0.4524 MEEPQYREHPKTKIATIPPPQPPHSDGATPELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAIAMSLAYLYGQHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELREVLPKLSSQTLHALLTSNDLWIPNEETRFELALHTFLAKGAHCKVEHPVHGISGSESATGIHSDFINGKGKSVIDSCTAKRLETDVGKMSLKSDLKDPSTPSLLVELADPVADFNDGVSVSNERVQQSSYVSSPNLNPRYTCDMEGPSLGNSLPDTDGMRTPCYVEMPLGTGATAMGAPGVGIEGPSEEGPCYHLENNSWLVRDQSRHCFSSNSCNELTSSDWGRYGAPFISWNGQVVGRKLNAHPRGNFRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMNCTCQKQFTFSHGASTTGSYMQEHNQNIMPGSAGNIYVAESSAGERNGTFRPVRVHVRGAIDGLAGIGRGTTFVPASASAPTRVVFSRVPFGVGNRNYPQSAANDDSETRADPNGDLSGDGLTALVGLSLGGSNGTNVHTDLTQRGYEMGMQSSMSGSTSGGASTGGIPMQMLETPENTIGIDWDNVNSTSISLDMKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDLQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLTVPSKREMMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03038 867 ProSiteProfiles BTB domain profile. 57 127 IPR000210 GO:0005515
Spst3g03038 867 MobiDBLite consensus disorder prediction 617 640 - -
Spst3g03038 867 MobiDBLite consensus disorder prediction 1 31 - -
Spst3g03038 867 Pfam BTB/POZ domain 51 155 IPR000210 GO:0005515
Spst3g03038 867 SMART BTB_4 57 157 IPR000210 GO:0005515
Spst3g03038 867 SUPERFAMILY POZ domain 51 155 IPR011333 -
Spst3g03038 867 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 867 - -
Spst3g03038 867 Gene3D Potassium Channel Kv1.1; Chain A 34 190 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst3g03038 BTB 1.6e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03038 - - gmx:100806711 1618.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03038 3 80141352 80146627 Spst3g03038 3 80141352 80146627 ECH