Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03010 ATGAAGGCTGCGCCGAAGCTAGCGTGTCAATATGATTTTGACCACTACATGTGCCACGTTGGAACTGGTGAAGAAACCTCTCAAACATTTTATTACATCAAAGAAGTTGTGCTTCTGTGGAGAAAGTTCAGGAAAAGCAAGAGAATTATCATGGTTCTTTTTCCATCTTTTGTGAATGGATTGGCGAGAACCGTGTCAATCAAGAAAGAGAAGAATTGTAAAAAGGAAGATGGAAGGAAAGCTGCGGAAGAACTGGCAAAGGAAGCAAGGAAGAATGAATTGTTACTGAGTTCATCTGGAGTTGTTAAGTCGACCAAGGCCAACAATTTCGTTTCCGTGTTCACTAATAAGGGTCAGAAAGGAGTCAATCAGGATCGTCTTCTAGTTTGGGAGGAATTTGGATGCCAACAAGACATGATGTTCTGTGGAGTTTTTGATGGGCATGGCCCTTGGGGACACTTTGTAGCCAGAAGGGTCAGGAAACTACTGCCAGCCTTTTTGCTCTGCAATTGGCAGGAAAACCTGGCTGCGACATCACTTGACCTAGATTTCCAGATGGAAGCAGACAAACATATCCATGGATTGGACATGTGGAAGCACTCCTACACCAAGACTTGTGCTGCTGTTGATCAGGATCTGAAGAAGCAAACTGGGTTTGATTCCTTTCTTAGTGGCACGACAGCATTGACAATTATCAAACAGGGTGAAGATCTTATTATAGCAAACATAGGTGATTCTAGGGCTGTCTTGGCAACCACCGCAGAGGATGGCACATTAACTCCACATCAGCTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCTGAACGCATAACGCAGTGTAGAGGGCGGGTATTTAGTTTGGAAGATGAACCAGGAGTGTACAGGGTGTGGATGCCAAACGGTAAAACACCAGGACTAGCAATATCTAGAGCCTTTGGAGACCACTGCATGAAGGACTTTGGACTAATCTCTGCACCAGATGTCACACACACCCAACTTACCACCAGGGATCACTTTGTCATCTTGGCAACTGATGGGGTATGGGATGTCATATCCAACCAGGAAGCAGTGACGGTTGTTTCTGCAACGCCACATAAAGAAAAAGCAGCTCAAAGGCTCGTGAAATTTGCCATACATGAATGGAAACGGAAGAAAAGTGGCATTGCTATGGATGACATGTCAGCTATTTGCCTCTTTTTTCACTCTTCCCCTTCCCATCAACTCCCAGCCATTAAGATTGTTGATTAA 1254 0.445 MKAAPKLACQYDFDHYMCHVGTGEETSQTFYYIKEVVLLWRKFRKSKRIIMVLFPSFVNGLARTVSIKKEKNCKKEDGRKAAEELAKEARKNELLLSSSGVVKSTKANNFVSVFTNKGQKGVNQDRLLVWEEFGCQQDMMFCGVFDGHGPWGHFVARRVRKLLPAFLLCNWQENLAATSLDLDFQMEADKHIHGLDMWKHSYTKTCAAVDQDLKKQTGFDSFLSGTTALTIIKQGEDLIIANIGDSRAVLATTAEDGTLTPHQLTTDFKPNLPQEAERITQCRGRVFSLEDEPGVYRVWMPNGKTPGLAISRAFGDHCMKDFGLISAPDVTHTQLTTRDHFVILATDGVWDVISNQEAVTVVSATPHKEKAAQRLVKFAIHEWKRKKSGIAMDDMSAICLFFHSSPSHQLPAIKIVD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03010 417 SMART PP2C_4 101 400 IPR001932 -
Spst3g03010 417 Pfam Protein phosphatase 2C 134 381 IPR001932 -
Spst3g03010 417 PANTHER PROTEIN PHOSPHATASE 89 400 IPR015655 GO:0004722|GO:0006470
Spst3g03010 417 ProSiteProfiles PPM-type phosphatase domain profile. 110 402 IPR001932 -
Spst3g03010 417 SUPERFAMILY PP2C-like 104 404 IPR036457 -
Spst3g03010 417 FunFam Probable protein phosphatase 2C 34 101 404 - -
Spst3g03010 417 CDD PP2Cc 109 402 IPR001932 -
Spst3g03010 417 Gene3D - 95 404 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03010 Spst-Chr3 79755334 79761826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03010 54 403 PP2C-type Phosphatase Gene Family AT3G05640 57.955 8.80e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03010 - - gmx:100817397 672.159