Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03006 ATGGGGAGAATGGGACAAGACTCGGACCCCAAGTCCAAGTTGGTATTAGAGATTTGCTCCATTTCCACGCGTTCTGTGGTATGTGTTCATCATGCACTTCTCTCAAAACCAGCCAACACAATTTTTGTTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAATGCCATTCGCAAGAGGTACCATAAACTGGCCTTACAAGTTCACCCAGATAAGAATAAACACCCCAATGCTGAAATTGCTTTCAAGCTCGTTTCTGAGGCATATGCATGTCTATCTAATGCAGCAAAGAGAAAAGCCTTTGACTTGGAGAGATATAAGCATTTCTGCTTCGAGTGCAAAAGAATTCCGTATACATCGAGCAATGTCCCTGGCAATTCAGGTGGATCAGGTTTTAAGGCATCATGGAATATCATCACTAGATCAAGATCTTTTAAACTTTGGAGAAATATTAGGGAAATGAGAGAAAGATTCGTGAACGAGGGTAAGGTGATAGAGAACTGTCTGCGAACAAATTCAATGTCAAGGAAAGAATCTCCAGTCCTCAATCCGGTTGGCTTTCTACAAAGAAGCAAGTCACTTCAAAGATTTGACAAAGAAACCCCTGTTTTCAATCCGTCGGATTATTTGTACCAAGGCTACCCTCATCTGAGGAGCAATATTTACAAGAATTCTTCAACTTTTTGGTACTTGCAGAGAAATAGTATGCTTCACAACGAAAGGGGAGGAGCGCTGGCCTCCCCTGTTTTTGAAGTCCAATCTAGGAGTTTGTATGCTAGCAAATTCGCTTTTGTCCCATCAAGATGTTAG 819 0.4188 MGRMGQDSDPKSKLVLEICSISTRSVVCVHHALLSKPANTIFVDWYCILGVEENAGVNAIRKRYHKLALQVHPDKNKHPNAEIAFKLVSEAYACLSNAAKRKAFDLERYKHFCFECKRIPYTSSNVPGNSGGSGFKASWNIITRSRSFKLWRNIREMRERFVNEGKVIENCLRTNSMSRKESPVLNPVGFLQRSKSLQRFDKETPVFNPSDYLYQGYPHLRSNIYKNSSTFWYLQRNSMLHNERGGALASPVFEVQSRSLYASKFAFVPSRC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03006 272 Gene3D DnaJ domain 43 167 IPR036869 -
Spst3g03006 272 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Spst3g03006 272 PANTHER BNAC03G44070D PROTEIN 24 121 - -
Spst3g03006 272 SUPERFAMILY Chaperone J-domain 38 108 IPR036869 -
Spst3g03006 272 PRINTS DnaJ domain signature 80 100 IPR001623 -
Spst3g03006 272 PRINTS DnaJ domain signature 46 64 IPR001623 -
Spst3g03006 272 PRINTS DnaJ domain signature 64 79 IPR001623 -
Spst3g03006 272 CDD DnaJ 44 97 IPR001623 -
Spst3g03006 272 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Spst3g03006 272 Pfam DnaJ domain 44 105 IPR001623 -
Spst3g03006 272 SMART dnaj_3 43 100 IPR001623 -
Spst3g03006 272 FunFam Chaperone protein dnaJ 49 isoform A 43 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03006 Spst-Chr3 79736219 79737419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03006 4 105 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.780 1.59e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03006 - - gmx:100801809 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03006 3 79736219 79737419 Spst3g03006 3 79736219 79737419 ECH