Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02983 ATGGTGGATCCGACTGGAAAAGGATCGGAAGGTGAGGACTCAAACCCTAACGCGCCTTCCTCGGGGAACAGTCCAAGCAGCAACAATGAGCTGAAGAAAACCTGTGCCGATTGCGGCACCACCAAGACCCCTCTCTGGAGGGGTGGTCCTGCAGGACCTAAGTCTCTGTGCAACGCGTGCGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATTCTCGGGATAAGCAAGGGCAGCAACGAGGATGGGAGAAAGGGGAAGAGGAGTGGCACCGCCGGCGCCGCTGCTATTGGTGGCGGCGCGTTGGGGAGGGAGGTTTTGTTGCACCGATCGCATTGGAAGAAACTCGGGGAGGAAGAAAAAGCTGCGGTGCTTTTGATGTCGCTCTCTTACGGATCCGTTTATGCCTGA 408 0.5686 MVDPTGKGSEGEDSNPNAPSSGNSPSSNNELKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGSNEDGRKGKRSGTAGAAAIGGGALGREVLLHRSHWKKLGEEEKAAVLLMSLSYGSVYA 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02983 135 CDD ZnF_GATA 34 69 IPR000679 GO:0006355|GO:0043565
Spst3g02983 135 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 69 - -
Spst3g02983 135 ProSitePatterns GATA-type zinc finger domain. 35 60 IPR000679 GO:0006355|GO:0043565
Spst3g02983 135 ProSiteProfiles GATA-type zinc finger domain profile. 29 65 IPR000679 GO:0006355|GO:0043565
Spst3g02983 135 Pfam GATA zinc finger 35 69 IPR000679 GO:0006355|GO:0043565
Spst3g02983 135 SMART GATA_3 29 83 IPR000679 GO:0006355|GO:0043565
Spst3g02983 135 PANTHER OS01G0976800 PROTEIN 13 135 - -
Spst3g02983 135 MobiDBLite consensus disorder prediction 74 94 - -
Spst3g02983 135 Gene3D - 30 91 IPR013088 GO:0006355|GO:0008270
Spst3g02983 135 MobiDBLite consensus disorder prediction 1 51 - -
Spst3g02983 135 MobiDBLite consensus disorder prediction 10 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02983 Spst-Chr3 79486863 79487428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02983 26 135 C2C2-Gata Transcription Factor Family AT5G49300 55.085 2.98e-36 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Spst3g02983 GATA 5.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02983 - - pvu:PHAVU_003G110400g 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02983 3 79486863 79487428 Spst3g02983 3 79486863 79487428 ECH