Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02978 ATGAGAGTTGAGAAAGAAGGACCAAGAAATGAAGGTGGACACGTTGGTGGTTTTTTCCAATTGTTTGACTGGACATCAAAATCTAAGAAGAAATTATTTGCAACCAAGTCAGATTTGCCGGAATCCTTGAAACAGAGAAGAAAAGTTGATGGAAACTTGGCAACGATGCTTCCCTATCTGGTGGACGAAGATGGTGAAATTGGAGTGGGGGGAGGTATTAGAGAAAGTGGTGATCATAGTTGTGCTACATCTGCTACAGACGATGAAGTATCTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTCATGGGATTAGATTCATTACCCTCTTCCAGTTTTTCTGATTCATATTCTACCCCATGCTTTGACAGCCAATGTATTCAAGATGTGCAGTATTGGAGAACAAAACTGAATCATCATCATGACCATCAGATCCTATATTCTGGAAAGTTAGCTGAGAAAACTGAGGGGACTTCTAGGAGCTTCATGGAGGCAATGCCTCTGCAGACCCGTAGCAGGCCGATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCCTTACACACCATAAACTTTTGTCCCCAATTAAGGGTCCAGGCTTTGTTCCATCAAATAATGCTACTTACATAATGGAAGCTGCAGCAAGAATTATTGAACCTAGCCGCCAAGTTGCTCCAAAGGCTAAAACACCTCTGGTAACATCATCAACAGTATCGTTGAGGGTTAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAGAAGGGACAACTACTTGGTTCATCTTCACTGACCTCTACAGTTAGAGATACAAAAGGAAAAAGAGAAACTTCTCTTAGAACTAGTAAGCATTATGAATCTTCTCAAAGGTTGACTGACTCTAATGATGCCAAATATCTAAAGGGACAACAATCTTTGAACAAAAGTGGGAATGGATCTGTGGATACACCTGTCAGATCATCTACTCAAGTAGAAGAAGATTCTTTTTCGAAAAATAAAGGGAAGTCTCTATCACTTGCAATCCAGGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGTTTGGTGGAGCATATAGAACAATGTGACACTAAAACCCCCCAGCAGCCTCTGAAGCCTAATGTTAAGAAGAGTTTGCACAAGAAATCTTCTGGACAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTTCAATGGATAAAGACAAGCTGGCATCAAAGCCATTGGTTTCCAATTCACATGGTAGAAAAGTTGTGATTGGGGATTCCTCTAGTGGACGTCATAGAAGCTCTAGTAATAAATCCATTGCAAAACCTAAAATCGGGCCCAAAAAATCATCCATGAACGTGACAGATAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCTACAGACAGGGACTGGAATGATAGGGATGTTGATAATTTATTCATTGACAAATCACAGAACTCTGTTCAGTCTAATCTAGTTAGTAATAAACACCATGGTGGGGCTGAAGAAGTCAAAAAGAAAGACATGGATGTAGTTTCATTCACATTTACCACGCCGTTGACAAGAAGCAATTCTGGTTTTGAGACTTCTGGCCTAAATTCATTGGATCAGCATATTAGAAGAGCGTTGATTGATACAGAAACTGATAGTGCACGGTCTCCAGTAGGATACAATGCAATCGGTGGTGATGCCTTGGGTATTCTTTTGGATCAGAAGTTGAGGGAGTTAACATATGGAGTTGGGAAATCTTGTGATGGCTCGCTCAAAGCAAGGTCACCTTCCAGTACTGCACCAAAATCAAAAGATCTGGTTCCCACCCTTAATTCAGTTAACCTCTTTCCACGGTTGGAACAGAAGAAAGATCAAGACATTATGTTGACAGATAAGTTATTCAGTAACTGGGAATGTGACAATTCCTTCACTTGTCTTCCTGACTTATCATCCAAGAATAGGCTTCGGCTTGATAAGGTGGACGAGTGCAAGATCAATCCTATGGAAGCAGAGTTATTCAATTCCGGACAGCCGAGTCCAATGTCTGTTCTTGACCCTTCTTTTTCTACTGAAAGCTGTGACTCTCCATTCAGCGCAAATGCTGCCAGTTCAGAAGACAAAAAGAGGAGGAAGCAAGTCGTGCGCTCAGGAAGTGGCTATACAGATTTGTTTGATTCAGCATCAGCTAGGACAATGCTAAAGAAACAAGCAAGCACATGTTCCCAAATGAAGTTTGGACAATCAAGTACATGGGAGTTAGACTATGTGAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGTAGAGCTCGTGACATTGTGAACCCCCATCTGTTCAACCAGTTGGAAAATAGAAGGGGAAGGTTTGAGAGTGATGGTGGTGAGTGTAGAATAAGAAGGAAAGTTATATTTGATTGTGTGCGTGAGTGTTTGGACTTGAGATGTAGATGTTGTGTTGGTGGGGGGTACAAAATGTGGGCAAAAGGAGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAGGGAAGTGTGGAAGGAAATTTCAAGTTGGAGGGATATGGGGGACTCAATGGTGGATGAACTGGTAGATAAGGACATGAGCATCCAACATGGACGATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTGGTTGAAGACCAAATATTTGATTCTTTGGTTGATGATTTCGTTGCTGAAATCCTTCAATTATAA 2787 0.4116 MRVEKEGPRNEGGHVGGFFQLFDWTSKSKKKLFATKSDLPESLKQRRKVDGNLATMLPYLVDEDGEIGVGGGIRESGDHSCATSATDDEVSGTRAPGVVARLMGLDSLPSSSFSDSYSTPCFDSQCIQDVQYWRTKLNHHHDHQILYSGKLAEKTEGTSRSFMEAMPLQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKGPGFVPSNNATYIMEAAARIIEPSRQVAPKAKTPLVTSSTVSLRVRDLKEKVEASQKGQLLGSSSLTSTVRDTKGKRETSLRTSKHYESSQRLTDSNDAKYLKGQQSLNKSGNGSVDTPVRSSTQVEEDSFSKNKGKSLSLAIQAKVNVQRREGLSFSSGKSLVEHIEQCDTKTPQQPLKPNVKKSLHKKSSGQDASGVLRQNNQKQNCSMDKDKLASKPLVSNSHGRKVVIGDSSSGRHRSSSNKSIAKPKIGPKKSSMNVTDSEKEVLYTRTNNFPRKKRSTDRDWNDRDVDNLFIDKSQNSVQSNLVSNKHHGGAEEVKKKDMDVVSFTFTTPLTRSNSGFETSGLNSLDQHIRRALIDTETDSARSPVGYNAIGGDALGILLDQKLRELTYGVGKSCDGSLKARSPSSTAPKSKDLVPTLNSVNLFPRLEQKKDQDIMLTDKLFSNWECDNSFTCLPDLSSKNRLRLDKVDECKINPMEAELFNSGQPSPMSVLDPSFSTESCDSPFSANAASSEDKKRRKQVVRSGSGYTDLFDSASARTMLKKQASTCSQMKFGQSSTWELDYVNDILCNVELMYMDFSLGRARDIVNPHLFNQLENRRGRFESDGGECRIRRKVIFDCVRECLDLRCRCCVGGGYKMWAKGVAMVRRNEWLAREVWKEISSWRDMGDSMVDELVDKDMSIQHGRWLDFEVDTFQLGAVVEDQIFDSLVDDFVAEILQL 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02978 928 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 924 - -
Spst3g02978 928 MobiDBLite consensus disorder prediction 372 469 - -
Spst3g02978 928 MobiDBLite consensus disorder prediction 395 414 - -
Spst3g02978 928 Pfam DUF761-associated sequence motif 84 114 IPR032795 -
Spst3g02978 928 MobiDBLite consensus disorder prediction 297 330 - -
Spst3g02978 928 MobiDBLite consensus disorder prediction 691 719 - -
Spst3g02978 928 MobiDBLite consensus disorder prediction 257 340 - -
Spst3g02978 928 MobiDBLite consensus disorder prediction 691 731 - -
Spst3g02978 928 MobiDBLite consensus disorder prediction 274 296 - -
Spst3g02978 928 Pfam Domain of unknown function (DUF4378) 769 920 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02978 Spst-Chr3 79453851 79457553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02978 3 926 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.191 4.48e-88 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02978 - - gmx:102660038 1410.59