Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02955 ATGGCGTTTTGGTGGCCGCTGCTCGTTTTAGCATTTGCTTACGGCATTTGTAGGTTCCTTCTCATGCTCATTCCTCCTAAGGTTCCTTCCATCGACGTTGACACTTCCGACGTGCTGGACGATGGAAACCACACGCAGGAGAACAGTTTCATATATGTACCTCCTAGGGGAACGTCTCAGCAATCAGGGAAGATAGTTCAGTGCTATGAGCCAGCAACTATGAAATATTTGGGATACGTTCCTGCATTGACGCATGAAGAGGTCAAGGAGCGTGTGGCAAAAGTAAGGAAGGCACAGAAAATGTGGGCAAAGTCCAGCTTCAAGCAAAGACGCTTATTTTTGCGTATACTTTTAAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCCCGTGATACTGGAAAGACGATGGTTGATGCCTCTTTAGGAGAAATAATGACAACATGTGAAAAGATCAATTGGCTACTGGCAGAGGGGGAGCAGTGGTTAAAGCCTGAATACCGGTCTTCTGGGAGATCAATGCTTCATAAAAGAGCTAAAGTAGAATTTCATCCCCTTGGGGTTATTGGAGCCATTGTTTCCTGGAATTATCCTTTCCACAATATTTTTAACCCTATGCTGGCAGCAATTTTTTCTGGAAACGGTATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCATTAGTATCTTCTGTTGATAAAGTCATATTTGTTGGATCGCCTGGTGTTGGGAAGATGATAATGAACAATGCTGCTAACACACTTATACCAGTGACACTGGAGCTTGGTGGGAAAGATGCATTTATTGTCTGTGAAGATGTAGATCTGGATCATGTAGCACAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCCGGGGCAGAGCGATTTTATGTCCACAGGGAAATTTATTCTTCTTTTGTTAGTAAAGTCACCAAAATTGTGAAGTCTGTTACGGCTGGGCCACCGCTTGTTGGAAAGTATGATATGGGAGCTCTTTGTATGCATGAGCATTCTGAAAGGCTTGATGGCCTATTAAATGATGCTTTGGACAAAGGAGCTGAAATTGTTGCCCGTGGGAGTCTTGGGCATATAGGTGAAGACGCAGTTGATCAATATTTCCCTCCTACTGTGATTGTGAATGTGAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGGCCAATCATGCCGATAATGAAATTCAGCTCTGATGAGGAGGTTGTCAGGCTTGCAAATGACTCAAAGTACGGGCTCGGCTGTGCTGTTTTCTCAGGCAATCAGAGTCGTGCCCGAGAGATAGCTTCACAGATACATACTGGGGTAGCTGCAGTTAATGATTTTGCATCAACATATATGTGTCAGTCCCTGCCATTCGGGGGAGTGAAACATAGTGGATTTGGACGATTTGGTGGTGTAGAAGGTTTGCGATCTTGTTGTCTTGTTAAAGCAGTTGTTGAAGATAGATGGTGGCCATTTGTCAAAACCAAAATACCTAAGCCTATTCAGTATCCCCTTGCAGAGAATGGATTCGAATTTCAGGAGTCACTTGTTGAAGTGCTTTATGGTCTTGGCACATGGGACCGCTTGCGAGCATTAGTAAACGTTTTGAAAATGCTGACTGAGCAGAATCCTGGTGGCAGCAGCAGCAGCAGCAGCAGCAAGAGAAGAAATGACTGA 1806 0.4396 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNHTQENSFIYVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTHEEVKERVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLAEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLIPVTLELGGKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVTAGPPLVGKYDMGALCMHEHSERLDGLLNDALDKGAEIVARGSLGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKYGLGCAVFSGNQSRAREIASQIHTGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRSCCLVKAVVEDRWWPFVKTKIPKPIQYPLAENGFEFQESLVEVLYGLGTWDRLRALVNVLKMLTEQNPGGSSSSSSSKRRND 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02955 601 Pfam Aldehyde dehydrogenase family 60 527 IPR015590 GO:0016491
Spst3g02955 601 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Spst3g02955 601 FunFam aldehyde dehydrogenase 22A1 65 320 - -
Spst3g02955 601 CDD ALDH_F15-22 69 531 - -
Spst3g02955 601 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Spst3g02955 601 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Spst3g02955 601 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
Spst3g02955 601 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 527 - -
Spst3g02955 601 FunFam Aldehyde dehydrogenase 22A1 305 500 - -
Spst3g02955 601 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02955 Spst-Chr3 79217837 79224982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02955 1 595 Aldehyde Dehydrogenase Gene Family AT3G66658 78.655 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02955 - - gmx:100802990 1155.97