Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02953 ATGGTTGACACTTTCAGTATAGAGAGCAGGCTTCTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGCGAACTCCTTCTGAATCATTGCTGAAGATAGGTTGCATACTAGGCCTTAGGGTCTCTCCTACATACAGGAGAAAAGGAGTTGGACTAAAACTTGTCACCTCAGTTGAAGAATGGATGGTGAGAAATGGGGCTGAGTATGCATTCCTAGCAACTGAAAAGAACAATGATGCTTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTGAGCTCACTTGTCATATTTGTGCATCCAATTAGTTTCCCTTCAAAGCACATTTCCAAGGATATAAACATTGAGAAGGTAAACATAGACCAGGCGATTTCCTTATACAGAAGAACCCTGAGGACGAAAGAGTTTTACCCATTGGACATGGATAGTATTTTGAAGGAGAACCTCAGCTTGGGTACCTGGGTGAGTTATTACAAAGAGGGAGGCATGCTCAACTTACAGAGAAAGGTAGAGAGTGAAGACATTATTACCAATGAAATCACAAGCTCATGGATTATCTTTAGCATATGGAACACTTGTGAGGCTTATAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAACTTTAAATCATGCAAGAGACAAAATTTTCCCTTGTCTGAGAATGTCGGTTAGTGACTCACTCTGCAGACCCTTTGGGTTTCTCTTCCTCTATGGACTCCATGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGATGTTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCAGAGTGATTATAACTGAACTAGGGTTTGGGGATACACTTGTAAACCATGTCCCTCAAGCAGCTTCTATGTCGTGTATCGATGATATTTGGTACACGAAGAGAATTTCAAGCCACAGTGACGAAAAGGATGATGAACTGCTTATGAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1194 0.4196 MVDTFSIESRLLIREFDEDRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPTYRRKGVGLKLVTSVEEWMVRNGAEYAFLATEKNNDASRNLFTNKCKYVSLSSLVIFVHPISFPSKHISKDINIEKVNIDQAISLYRRTLRTKEFYPLDMDSILKENLSLGTWVSYYKEGGMLNLQRKVESEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWMFTSRMGESLKDCRVIITELGFGDTLVNHVPQAASMSCIDDIWYTKRISSHSDEKDDELLMKRQIGNVFVDPRDF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02953 397 CDD NAT_SF 62 133 - -
Spst3g02953 397 Gene3D - 20 165 - -
Spst3g02953 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Spst3g02953 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 234 IPR000182 GO:0016747
Spst3g02953 397 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
Spst3g02953 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02953 Spst-Chr3 79203939 79205507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst3g02953 Acetyltransf_1 8.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02953 - - gmx:100814448 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02953 3 79203939 79205507 Spst3g02953 3 79203939 79205507 ECH
Spst3g02953 3 79203939 79205507 Spst6g01546 6 14507086 14508829 PCT