Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02935 ATGGCATCATCGTCATCGTCATCGTCGTCGCCGTCACCACCACCACCATCGTCATCCATGATCTCAAACCCGACAACCCAGAGCACGGACCGGTCACGTGACGCAAAGAGAAGAAAAAAGAAGAAAACACCGCAGCGAGAGGATCAGAGCCACCCCAAATGGAAATCGCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGTCAAGCCTTGGCCAGAGTCAACCTCGCCTCCGCGCCGCCAAAGGGAAAAGCCGTGCGCGAAGCCGCCGACAGAGTCCTAGCAGTGACGGCGAAGGGGAGGACGCGGTGGAGCCGAGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCACCAAACACAAGAGACAGAGAGTGACCACAACACCCCCTAACCGGTGGAAGAAAGCACGCGTGAGCGTTCACCGGCTGAAGGGGAAGAGTGGAGCGAGTGTGCAGAGGAAAGTGAGGCTCCTGGGACGGTTGGTTCCCGGTTGCCGAAAAGAACCGTTACCGGTTGTTCTGGAAGAAGCCATCGATTACATACCCGCGCTTGAGATGCAGGTTCTAGCCATGAACGCCCTCTTTAACCTTCTCTCCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGGCGCCTCCTCCGGTAGCCCCTCATAA 654 0.5657 MASSSSSSSSPSPPPPSSSMISNPTTQSTDRSRDAKRRKKKKTPQREDQSHPKWKSQAQQQIYSSKLRQALARVNLASAPPKGKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFTKHKRQRVTTTPPNRWKKARVSVHRLKGKSGASVQRKVRLLGRLVPGCRKEPLPVVLEEAIDYIPALEMQVLAMNALFNLLSASSSSSSSSSGASSGSPS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02935 217 MobiDBLite consensus disorder prediction 1 61 - -
Spst3g02935 217 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 56 201 IPR044660 GO:0006355
Spst3g02935 217 CDD bHLH_AtIBH1_like 142 194 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02935 Spst-Chr3 79014862 79015515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02935 49 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 56.000 7.34e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02935 - - pvu:PHAVU_003G116200g 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02935 3 79014862 79015515 Spst6g01528 6 14366219 14366836 PCT