Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02881 ATGGAGTTAACTCCAAGAGGAAGGACCCAAGGCCATGTGTTGACCTTTGAGAGAGATGCAGATTCTTTTGTCGAGGAAGATAAGGAGCTTCAATCCAAGTGGGCTGCAATAGAGAAGCTACCAACTTTCAAAAGGATTAAGACTTCCTTTGTTGATATCAGTCAGGAGGAGAGTGCAAGCAGCAGCAGAGAAGCAGTGGAAAAGTTTGGAGCTTGGAGGAGCAGCAGCAAAAGGGTGGTTGATGTTACCAAGCTTGGTGCAGTGGAAAAGCGTTTGTTCATTGACAGGCTCATAAAACACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGAAAGAGTCAATGTGAAGTTGCCCACCGTGGAGGTCAAGTACAAGAACCTGAATGTACGAGCAGAATGTGAGGTTGTTCAAGGGAAGGCACTCCCAACTCTATGGAACTCTTTTTCTAGCACACTTTCTGGTTTCATGAAGACTATATCGTGTAATTCTCGAGGAGCAGAGATAAGCATTCTGAATGATGTCAGTGGCATTGTTAAGCCATCAAGGCTTACTCTTCTTCTTGGTCCACCCGGCTGTGGGAAGACAACCTTGTTAAAGGCACTGGCTGGAAAACTAGAGCAGTCCCTCAAGGTTTCTGGAGAAATCTCTTACAATGGTTACAAGCTAGATGAATTTGTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTCCACGTTCCAGAGATGACTGTGAGAGAAACAATTGACTTCTCGGCACGCTGTCAGGGAGTTGGAAGCAGAGCTGATGTAGTGGCTGAAATCACCAGGAGAGAAAAGGAAGAAGGAATCATCCCTGACTCAGATATTGATACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTGGATATCTGCGCTGACATATTGGTAGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATCGTGGGTCCTATAAAAGCTCTTTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACGACCTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATTACAGATGCAACTGCAGTTCTTTCACTCCTTCAACCAGCACCAGAAACCTATGAGTTGTTTGATGATCTAATATTGATGGCTGAGGGGAAAATAGTATACCATGGCCCCCGCAGTCAAGCACTCCAATTTTTTAAGGACTGTGGTTTCTGGTGCCCTGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCCCAGATATTCCTTACAGATATATTTCAGTGGATGAGTTCTCTCAAATATTCATATCAAGTTATTGGGGAAGAATGTTAAATGATGAGCTCTCACAACCAAACAATAAATCTGAATCCCATAAAAATGCTTTATCATTTAGCAAGTACTCTTTGGGAAAGTGGGATTTGTTTAAAGCTTGTATGAAAAGGGAGATTCTGCTCATGAAAAGAAATTCATTTATCTATGTTTTTAAAACTGTACAGCTTACAATCACAGCAATCATAACAATGACAGTCTTCTTACGCACTCAGAGGGCTGTGGACTTGATAGGTGCAAACTATTTATTGGGTTCATTGTACTATACACTTGTCCGGCTCATGACCAATGGAGTTGCAGAATTAATCATGACTATTGCTAGACTCCCTGTTGTTGATAAGCAGACGGAATTCTATCTCTATCCAGCTTGGGCTTACTGCCTTCCATCTGCCATTCTAAAGATTCCATTTTCAGTACTTGATTCTATTGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCCTCCGCCAGTTTCTTTTGCTTGTTACTTTGCATATGTCATCAACCTCCATGTGTCGTTTCCTTGCTTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGTTCTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGGCCATCACTACCACGGTGGTTGAGGTGGGGATTTTGGCTTTCTCCCATGTCGTATGGGGAAATTGGAATAACTCTCAATGAATTTCGTGCCCCTCGCTGGCAAAAGATCCAAGAGGGAAATATCACTGTTGGGAAAGAGGTTCTTAGTACTCACGGTTTAGACTTTGACAGCAACTTCTACTGGATATCAGTTGGAGCCCTACTTGGTTTCACTATACTGTTTGATTTTGGATTTGTCTTAGCATTAACGTACATAAAACACCCTAAGATGTCTCGAGCTTTAGTCTCAAAAAAGAGGCTCTCTCAACTAAATGAACAAGAAAAAAGCGGTAATGTGGAACTGAAGTCAGTTACTGTTGATATTGGCCACAACACACCAAGGGGAAATCAAAGCACAGGGAAAATGGTCCTACCCTTTGAGCCATTGTCAATAGCATTTAAGGATGTCCAGTATTTTGTTGATATTCCTCCGGAGATGAAAAAACATGGTTCTGATGAGAAAAGATTACAATTGCTCCGTGATATCACAGGAGCCTTTAGACCAGGAGTTCTCACTGCACTGATGGGGGTCAGTGGAGCAGGGAAGACAACTCTGATGGATGTTCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGCAGGATACCCTAAAGTGCAAAAGACATTTGCTAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCTCCATACATAACCGTTGAAGAATCTGTAACATACTCAGCTTGGTTGCGATTGCCAACAGAAATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGGAACAATTGAACTTGATGATGTAAAGGATTGCTTGGTTGGCATACCTGGCCAAAGTGGCTTATCTACCGAGCAACGCAAAAGACTAACCATCGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTTATGGATGAACCTACATCTGGTTTGGATGCTCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGAACCACTGTGTGCACTATACACCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGACAGATTATTTATAGTGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAATATACCTGGGGTGCCAAAGATCAAGGACAATTATAATCCAGCAACCTGGATGTTGGAAGCTACCTCTGCATCTGTAGAAGCAGAACTTAAAGTAGATTTTGCTCAAATATATAAAGAGTCACACCTTTACCAGGATACCCTTGAAGTGGTGAGAGTGTTAAGTGAACCAGCACCAGGTTCGAGAGACTTACACTTCTCAACTCGTTTCCCACAAAATAACTTGGGACAGTTCATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCATTTTCATGATTGTTTGTGCAATAATATTTGGAGCAGTATTTTGGCAGAAAGGGAATGAAATAAACAATCAGCAGGATTTGTTCAACGTACTAGGATCCATGTATATTGCTGTAATATTCTTGGGTCTAAATTACTGCTCAACAATTCTGCCATATGTGGCTACTGAGCGTGCTGTCTTGTACCGAGAAAAATTTGCTGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAATCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCACTGGTCAGTTCAAAAAGTGTTTTGGTACTTCTACACCACATTCTGTACCTTTTTATACTTTGTATATCTTGGAATGATGATAATGTCGATGAGCTCAAATCTCGACATAGCTTCTGTCTTGTCGACTGCCGTCTATACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGTCCTACTGCTTGGTCCTTGAATGGCCTTCTAACTTCACAATATGGAGATTTGGAGGAGGAGGTAATCGTCTTTGGGAAGCGCCAATCAGTTGGTTCCTTTTTACGAGATTACTATGGTTTCCGGCATGACAGATTAAGCCTTGTGGCTGTGGTGCTCATTGCTTACCCAATTGTTTATGCTTCTCTGTTTGCTTATTTCATAAGGAAATTGAATTACCAAAGGAGATAA 4323 0.4113 MELTPRGRTQGHVLTFERDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDISQEESASSSREAVEKFGAWRSSSKRVVDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMERVNVKLPTVEVKYKNLNVRAECEVVQGKALPTLWNSFSSTLSGFMKTISCNSRGAEISILNDVSGIVKPSRLTLLLGPPGCGKTTLLKALAGKLEQSLKVSGEISYNGYKLDEFVPQKTSAYISQYDLHVPEMTVRETIDFSARCQGVGSRADVVAEITRREKEEGIIPDSDIDTYMKAISVEGQSENLQTEYVLKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETYELFDDLILMAEGKIVYHGPRSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRPDIPYRYISVDEFSQIFISSYWGRMLNDELSQPNNKSESHKNALSFSKYSLGKWDLFKACMKREILLMKRNSFIYVFKTVQLTITAIITMTVFLRTQRAVDLIGANYLLGSLYYTLVRLMTNGVAELIMTIARLPVVDKQTEFYLYPAWAYCLPSAILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRFLASVFKTDVAATTVGSLFLVLMFLFGGFILPRPSLPRWLRWGFWLSPMSYGEIGITLNEFRAPRWQKIQEGNITVGKEVLSTHGLDFDSNFYWISVGALLGFTILFDFGFVLALTYIKHPKMSRALVSKKRLSQLNEQEKSGNVELKSVTVDIGHNTPRGNQSTGKMVLPFEPLSIAFKDVQYFVDIPPEMKKHGSDEKRLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIAGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPTEIDSVTKGKFVEEVLGTIELDDVKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGMLGHHSSRLIEYFQNIPGVPKIKDNYNPATWMLEATSASVEAELKVDFAQIYKESHLYQDTLEVVRVLSEPAPGSRDLHFSTRFPQNNLGQFMACLWKQHLSYWRSPEYNLTRFIFMIVCAIIFGAVFWQKGNEINNQQDLFNVLGSMYIAVIFLGLNYCSTILPYVATERAVLYREKFAGMYSSMAYSFAQVAIEIPYILVQSILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFVYLGMMIMSMSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDLEEEVIVFGKRQSVGSFLRDYYGFRHDRLSLVAVVLIAYPIVYASLFAYFIRKLNYQRR 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02881 1440 Pfam ABC-2 type transporter 1049 1117 IPR043926 GO:0140359
Spst3g02881 1440 Pfam ABC-2 type transporter 392 470 IPR043926 GO:0140359
Spst3g02881 1440 Coils Coil 109 129 - -
Spst3g02881 1440 SMART AAA_5 186 411 IPR003593 GO:0016887
Spst3g02881 1440 SMART AAA_5 877 1069 IPR003593 GO:0016887
Spst3g02881 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 434 IPR027417 -
Spst3g02881 1440 FunFam ABC transporter G family member 34 164 468 - -
Spst3g02881 1440 CDD ABCG_PDR_domain2 837 1075 IPR034003 -
Spst3g02881 1440 Pfam ABC transporter 868 1020 IPR003439 GO:0005524
Spst3g02881 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 1075 IPR027417 -
Spst3g02881 1440 Pfam ABC-2 type transporter 513 724 IPR013525 GO:0016020|GO:0140359
Spst3g02881 1440 Pfam ABC-2 type transporter 1166 1378 IPR013525 GO:0016020|GO:0140359
Spst3g02881 1440 FunFam ABC transporter G family member 34 854 1086 - -
Spst3g02881 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 840 1093 IPR003439 GO:0005524
Spst3g02881 1440 CDD ABCG_PDR_domain1 173 416 IPR034001 -
Spst3g02881 1440 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 22 1440 - -
Spst3g02881 1440 Pfam Plant PDR ABC transporter associated 729 791 IPR013581 -
Spst3g02881 1440 Gene3D - 854 1086 IPR027417 -
Spst3g02881 1440 Gene3D - 162 427 IPR027417 -
Spst3g02881 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 434 IPR003439 GO:0005524
Spst3g02881 1440 Pfam ABC-transporter N-terminal 96 152 IPR029481 -
Spst3g02881 1440 Pfam ABC transporter 177 359 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02881 Spst-Chr3 78309353 78318192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02881 865 1052 Calmodulin-binding Proteins AT2G36910 28.141 2.30e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02881 K08711 - gmx:100779615 2662.49