Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02876 ATGATTAAATTGGAATGCGTGTCCTTTATGAACAATCAACGGGGAGATGAATTGAGGATCATGGGTTGTTTTGGCTTCTGCAAAGGAGATGATAGTGTTGCAATTGCTGACAGAGGACCTTTCACGCAAAGCACTCTTACTGGGAACGCTGCCAGTTATCCTGGCAGACATACAGCAGCAACTGTTCCTAGGCCTATAAATTTTCAACCTATTGCTGTCCCTTCCATTACAGTAGATGAGTTGAGGTCTTTGACAGATAATTTTGGCCAAAAATCTTTCATTGGTGAGGGTGCATATGGGAAAGTATATCATGCTACATTAAAAAATGGGCGTGCAGTGGTAATCAAAAAGTTAGATTCCAGTAATCAGCCAGAGCAAGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAGGAATGAAAATGTTGTTGAGCTTGTTAACTATTGCGTTGATGGTCCTTTCCGTGCCCTTGCCTATGAGTATGCTCCTAAAGGATCCCTCCATGATATTCTACATGGACGAAAAGGTGTCAAGGGTGCACAACCTGGTGCAGTACTCTCGTGGGCTCAAAGAGTTAAAATTGCTGTTGGGGCAGCAAAGGGACTTGAATATCTTCATGAAAAGGCAGAGATTCACATCATCCATCGTTACATTAAGTCTAGTAACATACTTCTTTTTGACGATGATGTTGCAAAAATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCGCGTCTTCATTCTACCCGTGTTCTTGGGACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAACTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATACTGCTGGAACTCTTAACCGGACGTAAACCAGTTGATCATACACTGCCCCGAGGACAGCAAAGCCTTGTCACTTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGCTAGACTAAAGGCAGAGTACCCTTCGAAGTCAGTTGCAAAGATGGCTGCTGTTGCTGCATTGTGCATACAATATGAAGCTGAGTTTCGGCCAAACATGAGCATTATAGTGAAAGCTCTACAGCCTCTACTGAATACTCGTTCTGTTCACTCAAAGGAATCACCAAACATGTAA 1146 0.4258 MIKLECVSFMNNQRGDELRIMGCFGFCKGDDSVAIADRGPFTQSTLTGNAASYPGRHTAATVPRPINFQPIAVPSITVDELRSLTDNFGQKSFIGEGAYGKVYHATLKNGRAVVIKKLDSSNQPEQEFLSQVSIVSRLRNENVVELVNYCVDGPFRALAYEYAPKGSLHDILHGRKGVKGAQPGAVLSWAQRVKIAVGAAKGLEYLHEKAEIHIIHRYIKSSNILLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLKAEYPSKSVAKMAAVAALCIQYEAEFRPNMSIIVKALQPLLNTRSVHSKESPNM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02876 381 FunFam Pti1 kinase-like protein 64 162 - -
Spst3g02876 381 CDD STKc_IRAK 94 367 - -
Spst3g02876 381 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 60 370 - -
Spst3g02876 381 FunFam pto-interacting protein 1 164 375 - -
Spst3g02876 381 Pfam Protein tyrosine and serine/threonine kinase 92 364 IPR001245 GO:0004672|GO:0006468
Spst3g02876 381 Gene3D Transferase(Phosphotransferase) domain 1 164 380 - -
Spst3g02876 381 SUPERFAMILY Protein kinase-like (PK-like) 68 364 IPR011009 -
Spst3g02876 381 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02876 381 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Spst3g02876 381 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02876 Spst-Chr3 78266671 78269933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02876 54 380 Receptor kinase-like Gene Family AT4G02010 44.126 2.28e-85 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Spst3g02876 PK_Tyr_Ser-Thr 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02876 K13436 - gmx:547596 665.996