Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02874 ATGCAAGAGTTTGGTGTCATCCAATATATATATTGGCAGCTGCTAATGGCATCTGATCTAAGTTCGGGGTTGTCCAAGGAAACGTCTGTTTTTGGGTTGAAAGCATGGGAATTAATGGGGATACTAGTTGGGTTGTTCATTATAATCATTCTTGTGGTGGTATCGATATGTCTTACTTCTCGAAAGAAATCTAGAAGAGTCAATGGCATGCTTCCCCTTAGCCATATGTTATCTGTCTCAGATGAGATCAAGGAAATTAGAGTCGATCACGTTTCATCCAATAATCATCCTCAGAATGGAGCTTTTATGAGTCTGTATGACAGGTTTAGCGACAGGGACTCTGAAAAGGTTTTGATCCAACCAAAGAATGGGGAAAATAGCAGTCAATCGGGCTCATTTGTTCATCTTAAGAAAGATGATGGTGGCTCTCAATCTGGTGAAGAAAGTGGTGCCAAGTCTGTTTCTACTTACAGGTCTTCTTCGCATCCCATAACTGCACCGTCTCCCTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGATGGGGACACTGGTTCACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCGAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGCCAGTTAATCAATGGGAGTCCCGTGGCTGTTAAGAAGCTACTCAATAATCTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGCCATGTGCGACACAAGAATTTGGTTAGACTTTTGGGCTATTGCATTGAAGGGACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAGTATGGTTTTCTTACTTGGGATGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCACTATCTTACTTGCACGAGGCAATTGAGCCAAAAGTTGTACATCGAGATATTAAATCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTGGCAAAGTTACTCGGTGCTGGAAAAAGTCATATCACAACTCGAGTAATGGGGACTTTTGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGCGATGTTTATAGCTTTGGGGTATTGCTCCTGGAAGCAATCACCGGAAGGGACCCTGTGGATTATAGCCGACCAGCTGCTGAGGTTAATTTGGTTGACTGGCTCAAGATGATGGTTGGGAATAGGCGCGCAGAAGAGGTGGTAGACCCTAACATTGAGACCAGGCCATCAACAAGTTCCCTTAAACGTGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAGGAATATCCCATACCCCGAGAGGATCGAAGACGCCGGAAGAGTCAAGCAGGAAATATGGAGGTGGAGGCCCAGAAGGAGGTTTCTGATACAGAGAAGAGTGACAATCCAGATTCAACTTCCAATGGCAGAAGGAACCAAAAGAAGTAG 1560 0.4327 MQEFGVIQYIYWQLLMASDLSSGLSKETSVFGLKAWELMGILVGLFIIIILVVVSICLTSRKKSRRVNGMLPLSHMLSVSDEIKEIRVDHVSSNNHPQNGAFMSLYDRFSDRDSEKVLIQPKNGENSSQSGSFVHLKKDDGGSQSGEESGAKSVSTYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGQLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSSLKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGNMEVEAQKEVSDTEKSDNPDSTSNGRRNQKK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02874 519 ProSitePatterns Protein kinases ATP-binding region signature. 203 226 IPR017441 GO:0005524
Spst3g02874 519 MobiDBLite consensus disorder prediction 120 134 - -
Spst3g02874 519 Pfam Protein kinase domain 198 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02874 519 Gene3D Phosphorylase Kinase; domain 1 179 272 - -
Spst3g02874 519 PANTHER OS01G0323000 PROTEIN 20 499 - -
Spst3g02874 519 CDD STKc_IRAK 203 469 - -
Spst3g02874 519 SMART serkin_6 197 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02874 519 ProSiteProfiles Protein kinase domain profile. 197 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02874 519 MobiDBLite consensus disorder prediction 468 519 - -
Spst3g02874 519 Gene3D Transferase(Phosphotransferase) domain 1 273 485 - -
Spst3g02874 519 MobiDBLite consensus disorder prediction 146 166 - -
Spst3g02874 519 FunFam Putative receptor-like protein kinase 179 272 - -
Spst3g02874 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Spst3g02874 519 MobiDBLite consensus disorder prediction 120 166 - -
Spst3g02874 519 SUPERFAMILY Protein kinase-like (PK-like) 181 476 IPR011009 -
Spst3g02874 519 FunFam Putative receptor-like serine/threonine-protein kinase 273 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02874 Spst-Chr3 78259725 78262597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02874 32 471 Trihelix Transcription Factor Family AT1G70460 39.778 2.17e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst3g02874 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02874 - - gmx:100793499 935.636