Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02868 ATGAAGGAAAGAATGCGACTTGGGAAATACGAGTTGGGTAGGACCCTTGGTGAAGGCAATTTTGGCAAAGTCAAGTTCGCTAAGAACACTGATTCTGGTCAACCTTTTGCTGTTAAGATCATTGACAAGAACAAAATCATCCATCTCAACATAACCAATCAGATAAAGAGGGAGATAGCCACCTTAAAGCTCCTCAGACATCCCAACGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACAAAAATTTATATGGTGCTTGAGTATGTGAATGGAGGGGAGTTATTTGAAACAATTGCATCCAAAGGTAAACGTACGGAAGGTGAAGGTAGAAAGCTGTTCCAGCAGTTGATTGATGGGGTGAGCTACTGTCACTCTAGAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTTCTAGTGGATAACAAAGGGAACCTAAAAATAACTGATTTTGGTCTTAGTGCTCTACCCCAGCATCTTAGGGCAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCTGAGGTTGTTGCTAATAGAGGCTATGATGGTGCAACATCAGATGTATGGTCATGTGGTGTTTTATTATATGTAATCCTAGCAGGATACCTACCATTTGATGATAGAAATATGGTAGTTCTCTTTCAGAAGATTATTAAAGGAGATGTTCAGATACCAAAATGGCTATCACCAGGTGCACAAAACATAATAAAGAGAATTCTTGATCCCAACCCTGAAACACGGATAACAATGGCTGGCATCAAAGAAGATCCGTGGTTCAAAAAGGGTTATGTTCCAGCAAATCCTGAGGATGAGGATGTATATGTTGACACTGAAGCCTTTTCCATCCATGAAGAGCCAAATGAAGCAGAACAGAGAAATTCAGGATCACCAACCCTTATCAATGCATTTCAGTTGATAGGGATGTCTTCGTGCCTCGACCTCTCTGGCTTCTTTGAGAAAGAGGATGTCTCTGACAGAAAGATAAGATTTACATCAAATCTTTCAGTTAAAGATCTGAATGAGAGGATGGAGGACACTGTGACAGAAATGGAGTTTATAGTCCAGAGGAAAAATGGCAAATTGAAAGTGATTCGGGAGAACAAAATGCACGAAACTATTGGATGCCTCTCAGTGACAATAGAGGTATTTGAAATAAGCCCATCATTGTATGTAGTAGAATTAAGGAAGTCTTGTGGAGATGCTTCTGCATATAAACAGTTATGCAAGAAAATATTGAATGATTTGAGTGTTCCTCCCAAGCAAGCCCTACTGGACTCAGCAGCCAATTACATGCCAGACAATATGTAG 1326 0.405 MKERMRLGKYELGRTLGEGNFGKVKFAKNTDSGQPFAVKIIDKNKIIHLNITNQIKREIATLKLLRHPNVVRLYEVLASKTKIYMVLEYVNGGELFETIASKGKRTEGEGRKLFQQLIDGVSYCHSRGVFHRDLKLENVLVDNKGNLKITDFGLSALPQHLRADGLLHTTCGSPNYVAPEVVANRGYDGATSDVWSCGVLLYVILAGYLPFDDRNMVVLFQKIIKGDVQIPKWLSPGAQNIIKRILDPNPETRITMAGIKEDPWFKKGYVPANPEDEDVYVDTEAFSIHEEPNEAEQRNSGSPTLINAFQLIGMSSCLDLSGFFEKEDVSDRKIRFTSNLSVKDLNERMEDTVTEMEFIVQRKNGKLKVIRENKMHETIGCLSVTIEVFEISPSLYVVELRKSCGDASAYKQLCKKILNDLSVPPKQALLDSAANYMPDNM 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02868 441 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Spst3g02868 441 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Spst3g02868 441 SMART serkin_6 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02868 441 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02868 441 FunFam Non-specific serine/threonine protein kinase 1 89 - -
Spst3g02868 441 FunFam Non-specific serine/threonine protein kinase 303 424 - -
Spst3g02868 441 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Spst3g02868 441 Coils Coil 342 362 - -
Spst3g02868 441 Gene3D Kinase associated domain 1, KA1 301 423 - -
Spst3g02868 441 CDD CIPK_C 307 418 - -
Spst3g02868 441 Pfam NAF domain 303 361 IPR004041 GO:0007165
Spst3g02868 441 FunFam Non-specific serine/threonine protein kinase 3 303 - -
Spst3g02868 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Spst3g02868 441 ProSiteProfiles Protein kinase domain profile. 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02868 441 Gene3D Transferase(Phosphotransferase) domain 1 90 270 - -
Spst3g02868 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 411 - -
Spst3g02868 441 SUPERFAMILY Protein kinase-like (PK-like) 7 277 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02868 Spst-Chr3 78222315 78226459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02868 73 430 CBL-interacting serine-threonine protein kinases AT3G17510 66.298 2.55e-168 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst3g02868 Pkinase 2.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02868 K07198 - gmx:100777468 777.319