Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02863 ATGGAAGGGGATATCAGTGTGAACGGAGATCCTAACAACAATCAAGAATCAAAGAAGAAAGAGTCCAAAGATGAACCCACCAAAACAGTACCCTTATACAAACTTTTCTCATTTGCTGATTCTTTGGATCACTTGTTGATGTTGGTGGGAACTGTGGGTGCAATTGGGAATGGAATCTCCATGCCCTTAATGACTGTGATATTTGGAAACATGATCAATGCATTTGGAGGATCCAGTACCACGGAAGAAGTTGTTGATGAAGTTTCCGATGTGTCTCTGAAATTTGTGTACTTGGCTGTGGGTACCTTTGCAGCATCACTTTTGCAGTTGGCATGCTGGATGATCACTGGAGAGAGACAAGCTGCAAGAATTAGAGGCTTATACCTTCAAACAATTCTGAGACAAGATGTCACCTTCTTTGATAAAGAGACTAATACTGGAGAGGTTGTAGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTGGGACAGTTTATACAATTAATCGCAACTTTCATTGGAGGATTTGTTGTGTCATTCATCAAAGGATGGCTTCTAACTCTTGTCATGCTGTCTAGTATTCCACTTCTTGTCTTGGCCGGGGCTATGATGAGCCTGGTTATTACAAAAGCGTCATCCAAGGGACAAGCTGCGTATTCCACAGCATCAAGTGTAGTAGAGCAGACAATTGGTTCTATCCGGACTGTTGCGTCATTCACTGGGGAGAGGCTAGCAATAGCTAAATACAATCAGTCATTAATCAAGTCATACATGACTGGAGTGCAAGAGGCACTAGCTTCTGGTTTGGGTTTTGGTGCGCTCTACTTCGTTTTTATCTGCAGTTATGCTTTGGCAATTTGGTTTGGTGCGAAAATGATAATCGAGAAAGGATACACAGGAGGAGATGTTGTGACTGTAGTGTTTGCTGTATTGACTGGCTCCATGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAGAGGAAGCCAGAAATTGATGCCTATGACACTAATGGTCGGAAGCTTGAAGACATTCGTGGCGATATAGAGCTTAGGGAGGTTTGCTTTAGTTATCCTACAAGACCTGATGAACTGATATTCAACGGATTTTCGCTTTCAATACCAAGTGGTACTACTGCAGCTTTGGTAGGACAAAGTGGAAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGTCTGGTGCAGTACTTATTGATGGTATCAATCTCAAAGAATTCCAACTCAAATGGATCAGACAGAAAATTGGCCTAGTCAGCCAGGAACCGGTTCTCTTTACTTGTAGCATTAAAGACAATATTGCCTATGGCAAGGATGGAGCAACTGATGAAGAAATCAGGGCTGCGGCAGAACTTGCTAATGCTTCCAAATTTATAGATAAACTACCTCAGGGACTAGATACAATGGTTGGTGAGCATGGAACTCAGCTCTCTGGGGGCCAAAAGCAGAGGGTGGCAATAGCAAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGACGCTGAATCTGAGAGAATTGTACAGGAGGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTTGCCCACCGCTTGAGTACTATAAGAAATGCCGATACCATTGCTGTTGTTCATCAAGGAAAAATAGTTGAAAGAGGTTCACACGATGAGCTCACCAAGGATCCGGAAGGAGCCTATAGCCAGCTCATCAGACTTCAAGAAATTAAGAGGTCAGAACCGAATGCAGAAGACAGAGAAAAACTAGAGAGTATATCGCATTCTGGAAGACATTCAAGTAAAAGGTCTTTCTTACGATCTATAAGCCAAGAGTCATCGGGAGTGGGAAACAGTGGTCGTCATTCATTCTCAGCATCATTTGGTGTGCCCACATCTGTTGGCTTCATAGCACCTGCCGGTGAAGGGCCTGAAGATCATCCTACAACGACTCCTTCACCACCAGAAGTGCCTCTTCGTCGCCTGGCTTATCTAAACAAGCCAGAGTTTCCAGTGATACTGATGGGAACTGTAGCTGCAGTGATATCTGGAGCAATATTACCTGTTTTTGGTCTATTACTTTCCAAAATGATAGGCATTTTCTATGAGTCACATCATGAACTTCGTAAAGATTCAAAAGTTTGGGCATTAATATTTGTTGCGGTTGGTGTGGTATCCTTGCTGGTTTTTCCGGCTAGATTCTACTTTTTTGGTGTTGCCGGTGGTAAGTTGATCCAAAGGATCCGTAAAATGTGTTTTGAGAAAGTAGTTCACATGGAAGTAAGTTGGTTTGATGAAGCTGAGAATTCGAGTGGAGCAATTGGAGCAAGACTCTCTACTGATGCAGCTTCTGTTAGAGCTTTAGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCCTCAGCACTAACTGGATTGGTAATTGCCTTTGAATCAAGCTGGCAGCTTGCTCTTATAATCCTTGCTATGGTGCCTCTACTTGGACTAAACGGATATCTGCAAATCAAGTTCTTGAAAGGATTCAGTGCAGATGCAAAGAGATTGTACGAGGAAGCAAGTCAAGTGGCGAATGACGCCGTGGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACAGAGGAAAATGTGAAGGACCAATTAAGACGGGCATAAGGCAAGGGATAATAAGTGGAGTTAGTTTTGGAATATCATTCTTTGTGCTGTACGCAGTCTATGCAACCAGTTTTTATGCTGGAGCTCGACTGGTAGAGGATGGCAAAACATCATTCACCAATGTTTTCCGGGTCTTTTTTGCTCTTAGTTTTGCAGCTATAGGAATCTCTCAATCTGGCTCTCTGGTCCCTGATTCAGTCAAAGCAAAAGGTGCTGCTGCTTCCATATTTGCCATTATTGACCGAAAGTCTAAAATAGACCCAAGTGATGACTCTGGAATGACATTGGAAGAAGTGAAGGGAGAGATTGAGCTTAAGCATGTCAGTTTCAAGTATCCTACAAGACCTGATATTCAAATATTCAGAGATCTTAGCTTGACCATTCATAGCGGCAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGGAAATCAACAGTGATCTCATTGTTACAAAGATTTTATGATCCAGACTCAGGTCACATTACACTGGATGGAAAAGAAATTCAAGGTCTGCAAGTTAAATGGCTTAGACAGCAGATGGGTCTGGTGAGCCAAGAGCCTGTACTGTTCAATGACACCATCCGAGCCAATATTGCATATGGAAAAGGAGACGCAACTGAGGCAGAAATTATAGCTGCGGCAGAATTGGCAAACGCCCATAAGTTCATTAGTAGTTTGCAGAAGGGTTATGACACGGTAGTAGGGGAGCGAGGAGTTCAATTATCTGGGGGACAGAAGCAACGGGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTACTTCTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAGAAAGTGGTTCAGGATGCACTTGACCGTGTTATGGTGGACCGGACCACAATAATAGTGGCTCATAGGTTATCCACTATTAAGGGTGCTGATTTAATTGCAGTAGTTAAAAATGGGGTGATAGCAGAGAAGGGAAAGCATGAAGCATTACTCAAGAAGGGAGGTGACTATGCTTCCTTGGTTGCGTTGCACACGACTGCTTCTACTTCTACATCTTAG 3822 0.4301 MEGDISVNGDPNNNQESKKKESKDEPTKTVPLYKLFSFADSLDHLLMLVGTVGAIGNGISMPLMTVIFGNMINAFGGSSTTEEVVDEVSDVSLKFVYLAVGTFAASLLQLACWMITGERQAARIRGLYLQTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQLIATFIGGFVVSFIKGWLLTLVMLSSIPLLVLAGAMMSLVITKASSKGQAAYSTASSVVEQTIGSIRTVASFTGERLAIAKYNQSLIKSYMTGVQEALASGLGFGALYFVFICSYALAIWFGAKMIIEKGYTGGDVVTVVFAVLTGSMSLGQASPSLSAFAAGQAAAFKMFETIKRKPEIDAYDTNGRKLEDIRGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTAALVGQSGSGKSTVVSLIERFYDPQSGAVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKDNIAYGKDGATDEEIRAAAELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTIRNADTIAVVHQGKIVERGSHDELTKDPEGAYSQLIRLQEIKRSEPNAEDREKLESISHSGRHSSKRSFLRSISQESSGVGNSGRHSFSASFGVPTSVGFIAPAGEGPEDHPTTTPSPPEVPLRRLAYLNKPEFPVILMGTVAAVISGAILPVFGLLLSKMIGIFYESHHELRKDSKVWALIFVAVGVVSLLVFPARFYFFGVAGGKLIQRIRKMCFEKVVHMEVSWFDEAENSSGAIGARLSTDAASVRALVGDALGLLVQNIASALTGLVIAFESSWQLALIILAMVPLLGLNGYLQIKFLKGFSADAKRLYEEASQVANDAVGSIRTVASFCAEEKVMELYRGKCEGPIKTGIRQGIISGVSFGISFFVLYAVYATSFYAGARLVEDGKTSFTNVFRVFFALSFAAIGISQSGSLVPDSVKAKGAAASIFAIIDRKSKIDPSDDSGMTLEEVKGEIELKHVSFKYPTRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGKEIQGLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGDATEAEIIAAAELANAHKFISSLQKGYDTVVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLKKGGDYASLVALHTTASTSTS 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02863 1273 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02863 1273 SMART AAA_5 397 583 IPR003593 GO:0016887
Spst3g02863 1273 SMART AAA_5 1055 1247 IPR003593 GO:0016887
Spst3g02863 1273 FunFam ABC transporter B family member 9 995 1017 - -
Spst3g02863 1273 Pfam ABC transporter 389 537 IPR003439 GO:0005524
Spst3g02863 1273 ProSitePatterns ABC transporters family signature. 509 523 IPR017871 GO:0005524|GO:0016887
Spst3g02863 1273 MobiDBLite consensus disorder prediction 610 655 - -
Spst3g02863 1273 FunFam ABC transporter B family member 9 34 366 - -
Spst3g02863 1273 CDD ABC_MTABC3_MDL1_MDL2 1028 1262 - -
Spst3g02863 1273 FunFam ABC transporter B family member 1 686 994 - -
Spst3g02863 1273 CDD ABC_6TM_Pgp_ABCB1_D2_like 696 1011 - -
Spst3g02863 1273 Pfam ABC transporter transmembrane region 47 321 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02863 1273 Pfam ABC transporter transmembrane region 707 977 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02863 1273 Gene3D ABC transporter type 1, transmembrane domain 34 613 IPR036640 GO:0005524|GO:0016020
Spst3g02863 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1028 1264 IPR003439 GO:0005524
Spst3g02863 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 370 606 IPR003439 GO:0005524
Spst3g02863 1273 MobiDBLite consensus disorder prediction 611 631 - -
Spst3g02863 1273 SUPERFAMILY ABC transporter transmembrane region 28 354 IPR036640 GO:0005524|GO:0016020
Spst3g02863 1273 FunFam ABC transporter B family member 1 360 609 - -
Spst3g02863 1273 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 707 993 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02863 1273 MobiDBLite consensus disorder prediction 636 655 - -
Spst3g02863 1273 Gene3D ABC transporter type 1, transmembrane domain 995 1269 IPR036640 GO:0005524|GO:0016020
Spst3g02863 1273 PANTHER ABC TRANSPORTER B FAMILY 12 761 IPR039421 -
Spst3g02863 1273 Gene3D ABC transporter type 1, transmembrane domain 689 994 IPR036640 GO:0005524|GO:0016020
Spst3g02863 1273 Gene3D - 1018 1266 IPR027417 -
Spst3g02863 1273 Gene3D - 360 609 IPR027417 -
Spst3g02863 1273 CDD ABC_MTABC3_MDL1_MDL2 370 608 - -
Spst3g02863 1273 ProSitePatterns ABC transporters family signature. 1167 1181 IPR017871 GO:0005524|GO:0016887
Spst3g02863 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 608 IPR027417 -
Spst3g02863 1273 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g02863 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1017 1264 IPR027417 -
Spst3g02863 1273 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 331 - -
Spst3g02863 1273 FunFam ABC transporter B family member 1 1018 1266 - -
Spst3g02863 1273 SUPERFAMILY ABC transporter transmembrane region 688 1013 IPR036640 GO:0005524|GO:0016020
Spst3g02863 1273 Pfam ABC transporter 1047 1195 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02863 Spst-Chr3 78176017 78181281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02863 5 614 Calmodulin-binding Proteins AT2G36910 37.540 3.49e-116 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02863 K05658 - gmx:100800293 2186.38