Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02860 ATGACTTCAACTGAGATGAGAGGATCAAGGAGTGATCATCCACCAGTTCAAGGTACTGAAAATACCCAACAAAAAATTGTTGGCAGGCAGCATGATTCCAAGAAAAACAAGGTGAAGGATGAAATCAATAAAACTGTTCCCTTTCACAAACTTTTCTCATTTGCACATCCTTGGGATTATTTTCTGATGATTGTTGGGGCAATAAGTGCTGTTTCTAATGGAATCTGTCTGCCTTTAATGACTTCATTTATTGGAGATGCTATTGATGCATTCGGAAGACATACTAATAATACACAAGAAGTAGTTCATGAAGTTTCCAAGGTGTCTCTAAAGTTTGCATCCATAGGTGCAGGTGCCTTTTTAGCAGCATTCCTGCCGACACATGCGTGCAATCTTCCAGAGGTGTCTTGCTGGGTGATCACTGGGGACAGACAAGCTGCAAGAATTAGAGCCTTGTACCTCAAAGCAATTTTGAGACAAGATATCAGCTTCTTTGACAAGGAAACCACAAGTGGAGAGGTTGTTGGAAGGATGTCAGGGGACACAGTTCTTATTCAAGAAGCCATGGGAGAGAAGTTAGGAAAGTTCATTCAGCATATGTCAAGTTTTTTAGGTGGCATAATCATAGCCTTCACCAAGGGTTGGCTTCTAAGCCTTGTCCTTCTATCTTCTCTTCTTCTTCTTGTCCTCTCGGGTTCCATAATGAACTTCGCTTTTGCTAAGAAGGCATCTCGCGGACAAGCAGCTTATTCTGAAGCAGCAACAGTAGTGTAG 774 0.4186 MTSTEMRGSRSDHPPVQGTENTQQKIVGRQHDSKKNKVKDEINKTVPFHKLFSFAHPWDYFLMIVGAISAVSNGICLPLMTSFIGDAIDAFGRHTNNTQEVVHEVSKVSLKFASIGAGAFLAAFLPTHACNLPEVSCWVITGDRQAARIRALYLKAILRQDISFFDKETTSGEVVGRMSGDTVLIQEAMGEKLGKFIQHMSSFLGGIIIAFTKGWLLSLVLLSSLLLLVLSGSIMNFAFAKKASRGQAAYSEAATVV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02860 257 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g02860 257 PANTHER ABC TRANSPORTER B FAMILY 29 257 IPR039421 -
Spst3g02860 257 SUPERFAMILY ABC transporter transmembrane region 49 256 IPR036640 GO:0005524|GO:0016020
Spst3g02860 257 MobiDBLite consensus disorder prediction 1 38 - -
Spst3g02860 257 CDD ABC_6TM_Pgp_ABCB1_D1_like 63 257 - -
Spst3g02860 257 Pfam ABC transporter transmembrane region 63 257 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02860 257 Gene3D ABC transporter type 1, transmembrane domain 58 257 IPR036640 GO:0005524|GO:0016020
Spst3g02860 257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 64 257 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02860 Spst-Chr3 78140188 78141712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02860 39 257 Calmodulin-binding Proteins AT2G36910 37.900 7.05e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02860 K05658 - gmx:100777713 347.821