Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02839 ATGAGAGGAGAGGGCCCAGAGTTTGAACAGTGTGAGAATGATGGGAGTGAGGTACAGCTCTGGCCAGCCTCTTCCTCCTCCTCTCATGTTTCATGTCGTTCTGGTGAAGCAACCCTTTTAGTTGCCATTGTGTGTTTGTTTCTGTTGGCAATGAGCCAAAGAAGCAAGAGTTGTGGAGGCATGAAGCTGCTGAGGGTGTTTGTGTTTGTGGGGTTGGTGATTGTGAAATGGGTGGAAGGCTTGGAGGATACTAATGTGACAGACATTGATATGCAATATGTCAGTGGAAGAGGTTTCTACAGACCTTTGATGGTTGGGCTTACTCTTATTAATGGCGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTACCACTTCCATCGGGGATATGGTTCAGGATCAAACAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAAAAATTGTCTTTACAGTAAGAAAACACGTCATGGTTCCTCATTCTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGACAATCCAGATTTTTTTAATTGGAATAGAATCAAAATCCGTTATTGTGATGGTGCATCATTTAGTGGTGACAGTCAAAATGCGGGAGCAGGATTGTATTTCAGAGGGCAACGCATTTGGCAAGCTGCTATGGAAGATCTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCCCTTCTATCTGGATGTTCTGCAGGAGGCTTAGCTACCATTATACACTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAATGCTTGAGTGATGCTGGATTATTCCTTGATTCTGTTGATGTATCTGGCCGTCGCAGCTTAAGGAATTTGTTTGGAAGTGTGGTCACCTTACAGGGAGTGCAAAAGAGCCTTCCAAGAAGTTGTATCAGTCGCCTCAATCCAATTTTGTGCTATTTTCCTCAACACTTAATTGCCAGTGTTAGGACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTTGCTCCACCATCTGCTGACTACCGATGGAACTGGTATGAATGCAGAAAAAATTATGCACGTTGCAGTGCACCGCAGATACAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTATAAAAATGGATTATTCATAAATTCATGTTTCGCTCATTGTCAATCAGAAAGACAGGATACATGGTTTTCTCGTGATTCTCCTCGTATTGGAAATAGGGGAATCGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTAGTGTCCAGGCTATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTATTCAAGTGA 1407 0.43 MRGEGPEFEQCENDGSEVQLWPASSSSSHVSCRSGEATLLVAIVCLFLLAMSQRSKSCGGMKLLRVFVFVGLVIVKWVEGLEDTNVTDIDMQYVSGRGFYRPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSFFMEKQIPFIGILSNKAEDNPDFFNWNRIKIRYCDGASFSGDSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGRRSLRNLFGSVVTLQGVQKSLPRSCISRLNPILCYFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKNYARCSAPQIQYLQGFRNQMLRSTRAFSRSYKNGLFINSCFAHCQSERQDTWFSRDSPRIGNRGIAESVGNWFFDRVSVQAIGCPYPCDKTCHNLVFK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02839 468 PANTHER NOTUM-RELATED 67 464 IPR004963 GO:0016787
Spst3g02839 468 Pfam Pectinacetylesterase 103 447 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02839 Spst-Chr3 77943345 77947828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02839 104 468 Carbohydrate Esterase AT1G57590 69.041 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02839 K19882 - gmx:100791571 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02839 3 77943345 77947828 Spst3g02839 3 77943345 77947828 ECH
Spst3g02839 3 77943345 77947828 Spst1g02379 1 32354654 32358898 ECH
Spst3g02839 3 77943345 77947828 Spst10g01839 10 18680470 18684801 ECH