Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02821 ATGCACCCTCCCAACAGTTCTGTGAATCGTACCTTAGCCAGACCTCAGATTGATTATGAAGTTAGTGGAGAGGGTTTAAGAGAAGCAATAAAAAATGGTGACATTGCTGCTGTTAAGAAACTTCTTAATGAGGGTGTGGATGCAAATTACAAGGACAAGCAAGGACTGTCTTTAATACATTTGGCTGCAGTCTTCAATCAAACTAAAATAGTTTTCACTCTCATGGATTCGGGGGCAAATCTGGAATACAAAAATGCACAAGGAGAAACACCTTTAGATTGTGCACCAGCTACATTGCAATAG 303 0.3993 MHPPNSSVNRTLARPQIDYEVSGEGLREAIKNGDIAAVKKLLNEGVDANYKDKQGLSLIHLAAVFNQTKIVFTLMDSGANLEYKNAQGETPLDCAPATLQ 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02821 100 Gene3D - 6 98 IPR036770 -
Spst3g02821 100 SUPERFAMILY Ankyrin repeat 27 95 IPR036770 -
Spst3g02821 100 ProSiteProfiles Ankyrin repeat profile. 54 86 IPR002110 GO:0005515
Spst3g02821 100 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27 11 99 - -
Spst3g02821 100 Pfam Ankyrin repeats (3 copies) 28 95 IPR002110 GO:0005515
Spst3g02821 100 ProSiteProfiles Ankyrin repeat region circular profile. 54 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02821 Spst-Chr3 77777913 77779328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02821 33 92 MAP Kinase Kinase Kinase AT3G58760 35.000 3.17e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02821 - - gmx:100814367 166.392