Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02815 ATGGCTGTTTCTCCACCCAGATACCGTTCCACCCTCGCATTCTCCTTCTCCTTTCTCTTCTTCCTCGCACTCTGCACCCCTCTCACCGCCGCCACAGGCTTCGCCGGTTCAGCCTGCCTCAGTGTCTCCGCCTCCCGCTTCGCCGGCTCAATCACCCAAGTCATCACCGCCATTGAAAAACTCTCGTCCATTCTCTCACGCTTCTCCACGCGCTTCGCCGACTTCCGCCTCGCCACTGCTATCGCCGACTGCCTCGACTTGCTCGACCTCTCCTCCGACGTCCTCTCCTGGGCCCTCTCCGCCTCTCAGAACCCCAAAGGGAAGCATAACAGCACGGGGAACCTGAGTTCCGATTTGAGGACATGGCTAAGCGCGGCACTTGCGCATCCACAAACTTGCATGGAGGGATTCGAAGGGACGAACAGCATTGTGAAGAGTTTGGTATCGGCTGGCATCGGCGAAGTGGTGACGTTGGTGGAGCAGCTTCTGGCGCAGGTGGTGCCCGTACACGATGAATTTGACGCGAGCAAGGGGCAATTTCCCTCGTGGGTTAAACCCAAGGAAAGGAAGCTTCTGCAATCGATTGGAGTGAGTCCTGATGCTGTGGTTGCTTTGGATGGGAGTGGGAACTACACTAGGATCATGGAGGCGGTGCTTGCGGCGCCCGATTACAGCATGAAACGGTTTGTGATTTACATAAAGAAAGGTGTTTATGTTGAGAACGTGGAGATCAAGAAGAAGAAATGGAACATCATGATGGTTGGAGATGGGATGGACGCCACCTTTATCTCCGGTAACCGGAATGTCGTCGACGGTTGGACCACCTTCCGGTCACCTACATTCGCTGTGAGTGGCAGAGGGTTCATAGCAAGAGACATTTCCTTTCAGAACACGGCAGGGCCTGAGAAGCACCAAGCAGTGGCACTGAGATCAGACTCAGACCTTTCCGTGTACTACCGATGTGGGATTTTCGGTTACCAAGACAGCCTATACACCCACACCATGCGCCAATTCTTCAGAGAATGCAGAATAACAGGCACAGTGGACTTCATCTTTGGCGACGCCACTGCCATGTTCCAAAACTGCTTGATACAAGCCAAGAAAGGCTTGCCAAATCAGAAGAACACGATCACAGCACACGGTAGAAAAGATCCAAATGAGCCAACAGGTTTCTCATTCCAGTTCTGCAACATCACTGCAGACTCTGACCTTGAACCCTTGGTCAGCACCACTCAAACGTACCTGGGCAGACCCTGGAAGGCTTACTCACGAACCGTTTTCATGCAATCGTTCATGAGTGAGGTGATAAGGGCAGAAGGGTGGTTGGAGTGGAATGGAAACTTTGCTTTGGACACATTGTACTACGGTGAGTACTTGAACACTGGAGCAGGTGCTGGCATAGCTAACCGTGTGAAATGGACAGGGTACCATGCATTGAATGATTCAAGCCAGGTGAATAACTTCACAGTGACTCAATTTATTGAGGGGAATCTGTGGTTGCCTTCCACTGGAGTGACCTACACTGCCGCATTCACGGTTTAA 1542 0.5233 MAVSPPRYRSTLAFSFSFLFFLALCTPLTAATGFAGSACLSVSASRFAGSITQVITAIEKLSSILSRFSTRFADFRLATAIADCLDLLDLSSDVLSWALSASQNPKGKHNSTGNLSSDLRTWLSAALAHPQTCMEGFEGTNSIVKSLVSAGIGEVVTLVEQLLAQVVPVHDEFDASKGQFPSWVKPKERKLLQSIGVSPDAVVALDGSGNYTRIMEAVLAAPDYSMKRFVIYIKKGVYVENVEIKKKKWNIMMVGDGMDATFISGNRNVVDGWTTFRSPTFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVYYRCGIFGYQDSLYTHTMRQFFRECRITGTVDFIFGDATAMFQNCLIQAKKGLPNQKNTITAHGRKDPNEPTGFSFQFCNITADSDLEPLVSTTQTYLGRPWKAYSRTVFMQSFMSEVIRAEGWLEWNGNFALDTLYYGEYLNTGAGAGIANRVKWTGYHALNDSSQVNNFTVTQFIEGNLWLPSTGVTYTAAFTV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02815 513 ProSitePatterns Pectinesterase signature 1. 225 244 IPR018040 -
Spst3g02815 513 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 161 IPR035513 -
Spst3g02815 513 SMART PMEI_2 30 165 IPR006501 GO:0004857
Spst3g02815 513 Pfam Pectinesterase 200 497 IPR000070 GO:0030599|GO:0042545
Spst3g02815 513 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 167 IPR035513 -
Spst3g02815 513 CDD PMEI-like_4 28 169 - -
Spst3g02815 513 Pfam Plant invertase/pectin methylesterase inhibitor 47 150 IPR006501 GO:0004857
Spst3g02815 513 SUPERFAMILY Pectin lyase-like 196 508 IPR011050 -
Spst3g02815 513 FunFam Pectinesterase 194 511 - -
Spst3g02815 513 ProSitePatterns Pectinesterase signature 2. 344 353 IPR033131 -
Spst3g02815 513 Gene3D - 195 511 IPR012334 -
Spst3g02815 513 PANTHER PECTINESTERASE 50 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02815 Spst-Chr3 77695416 77698804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02815 16 511 Carbohydrate Esterase AT3G43270 62.183 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02815 K01051 - gmx:100814987 844.728