Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02814 ATGGCTATTGTGTCTCGTAAACTTTTCCTCCTTCTTTTAACATTCTTCTTCTCATATACTATAGCTCTCAAGTCCTGCAATGCTTTCACAACATTTCATGCAAATCACACTTCCTTGAACAGAACAAACTCATTTCCTGAAGTTAGCTTCGATTCATCTAAGCTTTCCATCTCGATTAACATAAATCCAAACATCATCAACATCCTTCTTCAGTCCCTCCAAGCAGCAATTTCTGATGCAACAAAACTATCTGATCTATTAAACAACGCAGGACACTCAAGCATCATAGAGAACAAGATAGGAGCAGTCCAAGACTGTAGAGAACTTCAACAATCCACCTTAGCTTCCTTAGAACGATCACTATCAGGGATCCGTTCCCAAGACTCCAGAAAACTAGTTGATGCAAGAACCTACCTCAGTGCAGCCCTCAGCAACAAGGGCACGTGTCTAGAGAGCTTAGATTCCGCTTCAGGTACCCTTAAGCCAGTTCTAGTGGATTCTGTGATCAACTCTTACAAGCATGTCAGTGACTCTCTTTCAATGCTCCCTAAACCTGAGAAGAAAGCTTCCCAAGGACACAAGAACCGGCGTTTGTTGTGGTTGTCAAGAAAAAACCATCGCCTCTTGCAAAGCAATGATGGGGTGCTTGTTGTAGCTGCAGATGGAACCGGGAAGTTTAGCACCATCACTGAGGCTATCAACTTTGCTCCCAATAATAGCGTTGCTAGGACAATAATCTATGTCAAAGAGGGGAGTTACGAGGAAAATGTTGAAATCCCAAGCTATAAGACCAACATCGTTCTGCTTGGTGATGGAAAAGATGTCACTATTATCACTGGCAGCAGAAGTGTCGTTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCGGTCTCTGGTGAGGGTTTTCTCGCACGTGATATTGCTTTTGAAAACAAGGCAGGGCCAGAGAAGCATCAAGCAGTGGCCTTGAGAGTGAATGCAGACTTCACTGCTTTCTACAGGTGTGCCATGTATGGTTACCAAGACACTCTTTATGTACACTCCTTTAGACAATTCTATAGGGAGTGTGACATTTTTGGGACCATAGATTTCATATTTGGGAACGCAGCAGTGGTTTTACAAGCATGCAACATTGTGTCCAGGATGCCAATGCCTGGCCAATTCACTGTCATCACTGCACAGTCCAGAGATTCTCCTGATGAGGACACTGGCATTTCAATCCAAAACTGTTCAATTCTAGCTACCACAGATTTGTACTCCAATTCTAGTAGTGTCAAGAGCTATCTAGGAAGGCCATGGAGGGTTTATTCTCGTACTGTGTACCTTGAGTCCTACATTGATGCATTTATTGACCCGGTGGGGTGGACCCAATGGTCTAATGATGAAGGCTTGGACACTTTGTATTATGGAGAATATGCCAATTATGGGCCTGGTTCAGGGACTGATAACAGAGTACATTGGGCCGGGTACCATCTAATGGATTACGACAGTGCCTACAACTTCACAGTTTCGGAATTTATTATTGGTGATGCCTGGCTTGGGTCTACTTCATTCCCCTATGATAATGGGATTTAA 1578 0.4366 MAIVSRKLFLLLLTFFFSYTIALKSCNAFTTFHANHTSLNRTNSFPEVSFDSSKLSISININPNIINILLQSLQAAISDATKLSDLLNNAGHSSIIENKIGAVQDCRELQQSTLASLERSLSGIRSQDSRKLVDARTYLSAALSNKGTCLESLDSASGTLKPVLVDSVINSYKHVSDSLSMLPKPEKKASQGHKNRRLLWLSRKNHRLLQSNDGVLVVAADGTGKFSTITEAINFAPNNSVARTIIYVKEGSYEENVEIPSYKTNIVLLGDGKDVTIITGSRSVVDGWTTFRSATLAVSGEGFLARDIAFENKAGPEKHQAVALRVNADFTAFYRCAMYGYQDTLYVHSFRQFYRECDIFGTIDFIFGNAAVVLQACNIVSRMPMPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSNSSSVKSYLGRPWRVYSRTVYLESYIDAFIDPVGWTQWSNDEGLDTLYYGEYANYGPGSGTDNRVHWAGYHLMDYDSAYNFTVSEFIIGDAWLGSTSFPYDNGI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02814 525 Pfam Pectinesterase 216 511 IPR000070 GO:0030599|GO:0042545
Spst3g02814 525 PANTHER PECTINESTERASE 58 515 - -
Spst3g02814 525 Pfam Plant invertase/pectin methylesterase inhibitor 69 181 IPR006501 GO:0004857
Spst3g02814 525 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 182 IPR035513 -
Spst3g02814 525 SUPERFAMILY Pectin lyase-like 214 522 IPR011050 -
Spst3g02814 525 CDD PMEI-like_3 45 187 - -
Spst3g02814 525 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 184 IPR035513 -
Spst3g02814 525 FunFam Pectinesterase 210 525 - -
Spst3g02814 525 NCBIfam pectinesterase inhibitor domain 57 183 IPR006501 GO:0004857
Spst3g02814 525 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Spst3g02814 525 Gene3D - 212 525 IPR012334 -
Spst3g02814 525 FunFam Pectinesterase 32 184 - -
Spst3g02814 525 SMART PMEI_2 35 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02814 Spst-Chr3 77690019 77692007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02814 37 525 Carbohydrate Esterase AT2G26440 65.882 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02814 - K01051 gmx:102666380 872.078