Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02813 ATGGCGTTTCAGGATTTTGATCTTATCTCAGAGCGGCGGAGAAATGAGAAAAGGCAAAAGATGAGGAAGAGAATCATTATCGGCGTGGTTTCTGTCATAGTCCTCGTCGGCATGATCGGTGCAGTTCTCTTCGTCGTGGTTAAGAACGACGACACTGGAAATAAAAAAAGCACTAACAACAAGTCACGTACTAGTCATGCACCGCCACAAGGTGCCTCCCCCAAGCAAAACGTTGCGCACTCGGAGAAGGTTGTGAAAGCGGTGTGCAGCTCAGCAGATTTCAAGGAGAGGTGTGAAGAGCCTCTGAACAAGGCCATGGAGTCTGACCCCAAACTCACGCAACCCAAAGACCTTCTCAAGCTCTACGTGAAGCTCGCTGAGGACGAGGTTTCCAAGGCCTTCAACAAGACCATCTCTCTCAAGTTGGAAACTGAAGAAGAGAAAGGAGCCTTTGAGGATTGCAAAAAGCTGTTTGAGGATGCCAAGGATGACATCGCAACCTCCATCTCTGAACTTTCAAAAACTGAGCTCAAGAACATATCTGACAGGACTCCTGATTTAAATAGCTGGCTCAGTGCTGTCATCTCCTTCCAACAGACCTGCATTGATGGCTTCCCTGAAGGAAACACCAAGACTGAACTTCAAAATCTCATGAAGGATTCCAAGGAATTTATTAGCAACTCCCTTGCCATTCTCTCTCAGGTGGCATCGGCTCTTTCAGTATTCCAAACAATTGCCTCCTCACATGGGCGCTCCTTGCTATCACAGATCTCCAACTCCCCAATCGCATCTCTGGACAAAACTGACGGCCTCCCTTCTTGGATGAACCTCGATGACCGCAGGATCTTGAAGGCCACAGATAACAAACCTAAACCTAATGTTACCGTGGCAAAAGATGGCAGTGGAAACTTCAAAACCATTTCTGAATGTTTAAATTCTATCCCTGCAAAGTATGAAGGACGGTAA 966 0.4689 MAFQDFDLISERRRNEKRQKMRKRIIIGVVSVIVLVGMIGAVLFVVVKNDDTGNKKSTNNKSRTSHAPPQGASPKQNVAHSEKVVKAVCSSADFKERCEEPLNKAMESDPKLTQPKDLLKLYVKLAEDEVSKAFNKTISLKLETEEEKGAFEDCKKLFEDAKDDIATSISELSKTELKNISDRTPDLNSWLSAVISFQQTCIDGFPEGNTKTELQNLMKDSKEFISNSLAILSQVASALSVFQTIASSHGRSLLSQISNSPIASLDKTDGLPSWMNLDDRRILKATDNKPKPNVTVAKDGSGNFKTISECLNSIPAKYEGR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02813 321 MobiDBLite consensus disorder prediction 53 79 - -
Spst3g02813 321 NCBIfam pectinesterase inhibitor domain 78 235 IPR006501 GO:0004857
Spst3g02813 321 SMART PMEI_2 80 231 IPR006501 GO:0004857
Spst3g02813 321 Gene3D - 242 321 IPR012334 -
Spst3g02813 321 FunFam Pectinesterase 81 236 - -
Spst3g02813 321 PANTHER PECTINESTERASE 38 316 - -
Spst3g02813 321 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 234 IPR035513 -
Spst3g02813 321 CDD PMEI-like_3 87 237 - -
Spst3g02813 321 MobiDBLite consensus disorder prediction 58 77 - -
Spst3g02813 321 Gene3D Invertase/pectin methylesterase inhibitor family protein 81 236 IPR035513 -
Spst3g02813 321 Pfam Plant invertase/pectin methylesterase inhibitor 84 231 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02813 Spst-Chr3 77688203 77689168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02813 1 321 Carbohydrate Esterase AT2G26450 38.150 1.40e-65 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02813 - - vun:114177564 493.812