Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02812 ATGGGGTTCAGAAACACTGCAGGCCCTGATGGACATCAAGCAGTGGCTGCAAGAGTCCAGGCAGATCGTGCAGTGTTCGCCAACTGTCGTTTTGAGGGCTACCAAGACACTCTATACGTCCAAGCCCACAAACAGTTCTACAGGAGCTGCATCGTTAGTGGCACAATTGACTTCATCTTTGGTGATGCAGCTGTGGTGTTCCAGAACTGCATCATGGTTGTGAGGAAGCCAAATGACAACCAGCAGAACATGGTGACAGCACAAGGGAGAGAGGACAAGCAACAAGCCACTGGAATTGTGCTCCAGAAGTGCACAATCAAACCTGATGACAAACTGGTCCCAGTAAAGGACAAGATCAGGAGCTACCTTGGAAGGCCATGGAAGGAGTTCTCAAGAACCATTGTGATGGAATCAGAAATAGGTGACTTCATTCACCCTGATGGATGGACAGCTTGGAATGGAGACTTTGCTCTCAAAACATTGTACTATGCTGAGTATGGCAACACAGGACCTGGTGCCACCACCACCTCTAGGATCAAGTGGCCTGGTTACAAAGTCATCAGCAAGGAAGAGGCTTCCAAGTACACTGTGGGCTCTTTCTTGAGAGGCACATGGGTCCAGGGCACAGGAGTTCCCGCTACGCAAGGCTTGTTTAGCTATGATTATTACCACCATTCAGAGTAG 684 0.4927 MGFRNTAGPDGHQAVAARVQADRAVFANCRFEGYQDTLYVQAHKQFYRSCIVSGTIDFIFGDAAVVFQNCIMVVRKPNDNQQNMVTAQGREDKQQATGIVLQKCTIKPDDKLVPVKDKIRSYLGRPWKEFSRTIVMESEIGDFIHPDGWTAWNGDFALKTLYYAEYGNTGPGATTTSRIKWPGYKVISKEEASKYTVGSFLRGTWVQGTGVPATQGLFSYDYYHHSE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02812 227 Pfam Pectinesterase 1 203 IPR000070 GO:0030599|GO:0042545
Spst3g02812 227 PANTHER PECTINESTERASE 1 207 - -
Spst3g02812 227 FunFam Pectinesterase 4 1 217 - -
Spst3g02812 227 SUPERFAMILY Pectin lyase-like 2 216 IPR011050 -
Spst3g02812 227 ProSitePatterns Pectinesterase signature 2. 52 61 IPR033131 -
Spst3g02812 227 Gene3D - 1 217 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02812 Spst-Chr3 77684871 77687794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02812 1 218 Carbohydrate Esterase AT2G26450 62.100 2.85e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02812 - - gmx:100784679 407.912