Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02797 ATGGGTCACGTTGAAAGTGGAGCTACATTTTTGGCTGCAATTACACTCGCACTTCACCTCCTCCCAGCAACCACCCTTTTCCCTCCAGACGCCGCCGTTAGAGTCGTCAGGGTTCGGGGGGACGGCGCGGGGGACTTCAGGACGGTGACGGAGGCCGTCAACAGCATTCCGTCAGGGAACAAGCGGCGGGTGGTGGTGTGGATCGGCATGGGTGAGTATCGCGAGAAGGTCACCGTGGACAGGTCCAAACCTTTCGTCACGTTTTATGGAGAGAGGAATGGGAGCAACCCCCACACCATGCCCATCATAACGTACGACGCCACTGCGTTAAGGTATGGGACAGTCGACAGCGCCACCGTCGCTGTCGACTCCGACTACTTCGTCGCTGTGAATGTCGCTTTTGTGAACTCGTCTCCTAGGCCAGATAAAAATAGTGTGGGAGCACAAGCATTAGCCATGAGGATATCGGGGGACAAGGCTGCATTCTACAACTGCAAGTTCTTGAGCTTTCAGGACACTTTATGTGATGATAAAGGCAGGCATTTTTTCAAGGAATGCCACATCCAAGGCTCCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTACCATAGAATCGGTTGCAAAGGGTTTGAGTGTTATCACAGCACAAGGTAGGGAAAGCATTGCACAAGACACTGGATTCAGTTTCTTGCACTGCAACATTACGGGAAGTGGTCACAGAAACACTTACCTTGGGCGTGCCTGGAAGAAGAGCCCTAGAGTGGTGTTTGCTTACACGTACATGGGCTCCCTCATCAATGCCCGGGGATGGTTCACCAACCAACTTCCTCACCCCAAATCAAACCAGACAATCTACTACGGAGAATACAGGTGCAAGGGAGCAGGAGCTGCTTCCTCTGGGCGTGTAAAATTTCGGAAGATACTCTCTGAAGAAGAAGCAAAGCCATTCGTGAGCATGTCCTATATTCATGGCGGAAAGTGGGTTGTCCCACCTCCAAAGTTGTGA 1020 0.5127 MGHVESGATFLAAITLALHLLPATTLFPPDAAVRVVRVRGDGAGDFRTVTEAVNSIPSGNKRRVVVWIGMGEYREKVTVDRSKPFVTFYGERNGSNPHTMPIITYDATALRYGTVDSATVAVDSDYFVAVNVAFVNSSPRPDKNSVGAQALAMRISGDKAAFYNCKFLSFQDTLCDDKGRHFFKECHIQGSYDFIFGNGKSIYLRSTIESVAKGLSVITAQGRESIAQDTGFSFLHCNITGSGHRNTYLGRAWKKSPRVVFAYTYMGSLINARGWFTNQLPHPKSNQTIYYGEYRCKGAGAASSGRVKFRKILSEEEAKPFVSMSYIHGGKWVVPPPKL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02797 339 Pfam Pectinesterase 37 329 IPR000070 GO:0030599|GO:0042545
Spst3g02797 339 Gene3D - 34 336 IPR012334 -
Spst3g02797 339 FunFam Pectinesterase 31 335 - -
Spst3g02797 339 SUPERFAMILY Pectin lyase-like 34 333 IPR011050 -
Spst3g02797 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02797 Spst-Chr3 77526102 77527561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02797 26 339 Carbohydrate Esterase AT5G07410 50.000 3.08e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02797 K01051 - gmx:100790786 555.829