Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02794 ATGGATGATGCTGGAGGTTCCAAATTGGGTGGAATTAAGCAGATTGTGAGATTGAAGGAAATGTTTCAAAAGTGGCAAACTGTGAGTCTGGGCTCAAAAGAGTCAAACAATGATTCTGATGTGGCTCATCCAGGGGGCATTCCACCAATGGTTAGCAAAAGGTTAACAAATGTTGTGTATTGTGACTCTGATGAGGATAGCTGCTACAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCTGTCTATGTTGGCCCTGAGCTTCGGAGGTTTATCATCCCCACAAGCTACCTTAGCCACTCTTTGTTCAAGGTTTTGTTGGAAAAGGCTGCAGAGGAATTTGGGTTTGATCAGAGTGGTGGACTCACGATTCCATGTGAAATTGAGACCTTTAAATACCTCTTGAATTGCATGGAGAACCAGGATGACAGCTCCGCAGGAAACACAGGAACTGTGGAAGAATAA 471 0.4459 MDDAGGSKLGGIKQIVRLKEMFQKWQTVSLGSKESNNDSDVAHPGGIPPMVSKRLTNVVYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENQDDSSAGNTGTVEE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02794 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 56 136 IPR003676 GO:0009733
Spst3g02794 156 Pfam Auxin responsive protein 68 139 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02794 Spst-Chr3 77514916 77515853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02794 1 156 Calmodulin-binding Proteins AT3G43120 64.375 4.79e-71 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02794 K14488 - gmx:100795275 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02794 3 77514916 77515853 Spst3g02794 3 77514916 77515853 ECH
Spst3g02794 3 77514916 77515853 Spst9g02791 9 62088212 62089203 PCT