Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02788 ATGCAAACGCAACCAATTTCCACTCTGGCCTTCATGCTCGTCCTACTATTTTTGTCTCCACCACGCGCCGCCGGAGCAAGGCCATCGCCAGATCCACTTCGTTCATCGTGCGCGCAGGCCAGGTACCCCGCTCTCTGCGTCCAAACGCTCTCCAACTTCTCGAACCCCGCGGCCAAGCCTCTCGACCTGGCCCAGGCCGCCGTCAAGGCTAGCCTGGCCCGCACGCGCGCCCTCTCCGCCTACCTCAGGACACTGAAGGCCTCGTCGCAGGGTTTCGATCCGAGGCAACAAGTCGCGGTGAGTGACTGCGTGCAGCAGATAGCCGATTCGGTGAGTGAGTTGAGCAAGACGCTGAACGAGTTGCAGCACCTCCGCGACGGAGCCTTCCAGTGGCAGATGAGCAACGCCCAGACCTGGACCAGCGCCGCCATCACCAACGGTGACACATGCATTTCCGGCTTCAACACCGCCGGGAAAATCAAGTTGGATCTCAAGCGAAGAGTCGCCGACGTCTCCATGCTCACCAGCAACGCCCTTTACCTCATCAATCGCCTCGCTGATAGCGTTACCGGGAAGCCTCGCGCCAAGTCCGGAAACTGA 600 0.6083 MQTQPISTLAFMLVLLFLSPPRAAGARPSPDPLRSSCAQARYPALCVQTLSNFSNPAAKPLDLAQAAVKASLARTRALSAYLRTLKASSQGFDPRQQVAVSDCVQQIADSVSELSKTLNELQHLRDGAFQWQMSNAQTWTSAAITNGDTCISGFNTAGKIKLDLKRRVADVSMLTSNALYLINRLADSVTGKPRAKSGN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02788 199 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
Spst3g02788 199 SMART PMEI_2 28 181 IPR006501 GO:0004857
Spst3g02788 199 NCBIfam pectinesterase inhibitor domain 8 185 IPR006501 GO:0004857
Spst3g02788 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 181 - -
Spst3g02788 199 CDD PMEI-like_3 35 186 - -
Spst3g02788 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 187 IPR035513 -
Spst3g02788 199 FunFam Pectinesterase inhibitor 3 29 186 - -
Spst3g02788 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02788 Spst-Chr3 77470598 77471197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02788 33 188 Carbohydrate Esterase AT3G14310 27.778 1.66e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02788 - - gmx:100810705 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02788 3 77470598 77471197 Spst3g02788 3 77470598 77471197 ECH