Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02765 ATGGGACCCAGATATCTTATGTATGGAGACATATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGAGAAGTGTATGTGACACAAAAGTTTCTAGAGAATTTTTGCGGGGATCAGGTTCGTTTCTTAGCAAGATCATTTGCAGTACCCGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCCTATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCATTAGAGATTCCTGTTCTTCAATTGATGGGTGCACTCTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTACGTCTGCTTCACACCTGTGGCTTACCTGTTGAAGATGTAGACTTCATAAATTCTGACGGGAAGACAATGAACAAACTGTTACTGGAGATGATATTGGATCATGAAGTAGTATTGAATTTACAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAGAAGTTAGCCCTTGATTTGAGGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACACTGCGTGGGTGTGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCTGCCCAATCATTATTATTTATGCACGAGAACTGGTCTAAAACTTCCTTGCTATCGAAGTTAAAAGATCTTGCTGAAAGAAGAAAGTTGACAGACTTGACAATTGGCCCAGTCCTCACAGTTACGACTGATTCTATGCTTGAACATGTCAATAAGTTGCTTGAGATACCAGGATCAAAGCTGCTCTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCTATTAAACCAACAGCTGTTTATGTTCCTCTTGAGGAAATTATGAAGGATAACAATTTTGAACTTGTGACAAGAAATATTCGGACCCTTTCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTGACAGCTGCTGTAGTTTCGAATGATCCTTTATTTGTGCAGGAAGTCATTGGCAAGACGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACAACCGGAGCTCCACAGAATCATTGGTTTGGACCCGCCGGTGATCCTAGAGGTGCAGGAATTGGTACTCCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATTTTGGGCCGGTGTCAAAGAATTGGGAAATTCCTCCATCTACTTGA 1338 0.4118 MGPRYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEMILDHEVVLNLQANPRMTLFTGSSRVAEKLALDLRGRVKLEDAGFDWKILGPDVHQEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDNNFELVTRNIRTLSVVLDALERMHNHLTAAVVSNDPLFVQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDFGPVSKNWEIPPST 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02765 445 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 207 IPR016162 GO:0016491
Spst3g02765 445 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 9 445 IPR044638 GO:0004029
Spst3g02765 445 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 231 242 IPR016160 GO:0016491
Spst3g02765 445 FunFam probable aldehyde dehydrogenase 2 206 - -
Spst3g02765 445 Pfam Aldehyde dehydrogenase family 25 384 IPR015590 GO:0016491
Spst3g02765 445 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 214 388 IPR016163 GO:0016620
Spst3g02765 445 SUPERFAMILY ALDH-like 23 413 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02765 Spst-Chr3 77228835 77233462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02765 4 445 Aldehyde Dehydrogenase Gene Family AT5G62530 79.560 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02765 K00294 - gmx:100806579 803.897