Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02760 ATGACAATCGCATGGGGATCGATCTTCGCTAGTTGTTTCAAGAGTGAGTCTGTGTCTCCTTCCCCCAAGCCCACCAAAGTGGTGGCTACAAAGGGTGGTTCTTCTTCCAACAGGGTCTCCATAACGGACTTGAGTTTTCCTGGTTCAACGCTTTCGGAGGATCTCTCCGTTTCTCTAGTGGGGTCTAACCTGCATGTTTTTTCACTCGCCGAGCTGAAGATCATAACACAGAGTTTCTCTTCGAGTAACTTTCTAGGAGAAGGAGGTTTTGGACCTGTGCATAAGGGCTTCATTGATGACAAGCTTAGGCCTGGCCTCGAGGCTCAACCGGTGGCCGTCAAGCTCTTGGATTTGGACGGTTCTCAGGGCCATAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGCATCAACATCTGGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACACAGGCTCCTGGTCTACGAATATTTACCTCGAGGCAGCTTAGAGAATCAACTATTTAGAAGATTTACGGCATCGTTACCATGGTCAACAAGAATGAAAATTGCAGCGGGAGCTGCGAAGGGTTTAGCCTTTCTACATGAAGCAAAAAAGCCAGTCATCTATAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCTGATTATAATGCAAAGCTTTCTGACTTTGGCTTGGCAAAAGATGGTCCCGAAGGAGATGACACGCACGTTTCAACTAGAGTCATGGGCACACAAGGCTACGCGGCCCCAGAATACATCATGACAGGACATTTGACAGCAATGAGCGATGTATACAGTTTTGGAGTAGTTCTCTTGGAGATTCTAACAGGAAGAAGGTCAGTGGACAAAGGGCGCCCACCAAGAGAACAGAATCTCGTGGAATGGGCCAGACCTGTTTTGAATGATTCCCGGAAGCTTAGCCGAATAATGGATCCAAGACTTGAGGGACAGTATTCTGAGGTAGGGGCAAGAAAAGCAGCTGCATTGGCTTACCAATGTCTCAGCCACAGGCCAAGAAGTAGACCCTTGATGAGCACTGTGGTTAGTGTTCTTGAGCCTCTTAAGGACTTTGATGATGTTCCAATTGGACCATTTGTTTACACTGTTCCAACTGATCCAAATGAAGTGGCAAAAGAGGTTGAAACACCCAAGGAGAGGAAGAGGGAAAATGGTCATCATCATCATCATCACAGGAATCAACATCACAATAATGGTCATAAACATCATGATAATGATGAGGCCAATAAAGATGCAAATGGTCACCATCACCACCGAAACCATCGCCACAATGGCCATAAGCATCATCCACTTAAATCGCCCAAGACACCAATATCATCATCAGAGTCACAGAATAATGAACACCAAAATGGTAGAAGAAGCGGGTCAAACTCACCTGACACCTCCATTGCATCAGAAGCACAAGGAAGCATGGTTTAG 1452 0.4559 MTIAWGSIFASCFKSESVSPSPKPTKVVATKGGSSSNRVSITDLSFPGSTLSEDLSVSLVGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLEAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLPWSTRMKIAAGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLEILTGRRSVDKGRPPREQNLVEWARPVLNDSRKLSRIMDPRLEGQYSEVGARKAAALAYQCLSHRPRSRPLMSTVVSVLEPLKDFDDVPIGPFVYTVPTDPNEVAKEVETPKERKRENGHHHHHHRNQHHNNGHKHHDNDEANKDANGHHHHRNHRHNGHKHHPLKSPKTPISSSESQNNEHQNGRRSGSNSPDTSIASEAQGSMV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02760 483 ProSiteProfiles Protein kinase domain profile. 79 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02760 483 MobiDBLite consensus disorder prediction 394 409 - -
Spst3g02760 483 MobiDBLite consensus disorder prediction 410 425 - -
Spst3g02760 483 CDD STKc_IRAK 85 359 - -
Spst3g02760 483 MobiDBLite consensus disorder prediction 426 444 - -
Spst3g02760 483 PANTHER OS01G0588500 PROTEIN-RELATED 41 360 - -
Spst3g02760 483 MobiDBLite consensus disorder prediction 445 483 - -
Spst3g02760 483 MobiDBLite consensus disorder prediction 371 483 - -
Spst3g02760 483 Gene3D Phosphorylase Kinase; domain 1 48 161 - -
Spst3g02760 483 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Spst3g02760 483 FunFam Serine/threonine-protein kinase BIK1 48 161 - -
Spst3g02760 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Spst3g02760 483 SUPERFAMILY Protein kinase-like (PK-like) 54 357 IPR011009 -
Spst3g02760 483 FunFam Probable serine/threonine-protein kinase PBL8 162 370 - -
Spst3g02760 483 Pfam Protein tyrosine and serine/threonine kinase 83 355 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02760 Spst-Chr3 77181316 77183338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02760 65 394 Glycoside Hydrolase AT3G07070 50.450 2.56e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst3g02760 PK_Tyr_Ser-Thr 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02760 - - gmx:100799411 816.994