Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02741 ATGGAGAAGGGACTATTTGCTCGAAGAGTATGGACAAATCCTTGTTATCAAGTTGATGAGGGAGAAGCTCCGAAGTCATTACCGGAAATTTACTGGTTTTCTGAGTTGAGATTGACTCGTTCGGAGAAGCATTTGTGTACTAGGATTGACCCAGAGCCTTTGGAGCTTTTGTCGTTGGGTACAATGGCTGACAACCTCCTGGAGGGTTTGAATAGAGGTGCTTGGACAGCTCATGAAGACAAAATCCTCAGAGAATACATTAGGGTCCATGGTGAAGGAAGATGGAGAAACCTTCCCAAAAGAGCAGGTTTGAAAAGATGCGGGAAAAGTTGCAGACTTCGATGGTTGAATTATCTCAGACCTGATATTAAGAGAGGCAATATATCCTCTGACGAAGAAGAGCTCATTATCAGACTCCACAAGCTCCTGGGAAACAGATGGTCTTTAATAGCGGGGAGGCTTCCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAATTTAGGTAAAAAGGTGAAAGATGGCCACAAAACCACAAGCTATGCAAACAGCACACAGCAGAATCCAATGTCCCACTTGCCCAAACAACACACAGAATCTCTTCCTAAGCTAGATTCCCACCTGGTCCGCACAAAAGCCACCAAGTGCACCAAGCTGTTTTTTCCCCACCCATCAATGCTGCAATTGCCCAACAAGTCCAAGGCTGATGCAGAAGCAGATGAAGAAAAAGCAGAAGAAGATGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGACGGAAAAGAAAAAGAAAAAGAAGGCAGAGTTGTGGACGGCGTTCCAAGTGAGCAAATGGAACCCACTAGAAACGACAACGGGTTCCTGTCTTTACACGATGAAGGAAAAGAAGTCCCAACGGACATGCTGATAGATTTCAACGTGGGGGATATCTGCTTGTCTGATCTTCTGAACTCGGATTTCTCCAACACTTACAACTTCAGCTGCACTACTAGCATTGCTTGTTCGGACCAACCTGACCCCGTCTTCTCCGATGAAGCTCTCAGGGACTGGATGCAAACCAATTTAGCAGACGAAACGAATGCATCCAACAACCTTCATTCTTTGTTTTTCCTCGACACAACCGACCATAGACTTGAACAATCATAA 1176 0.4439 MEKGLFARRVWTNPCYQVDEGEAPKSLPEIYWFSELRLTRSEKHLCTRIDPEPLELLSLGTMADNLLEGLNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISSDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDGHKTTSYANSTQQNPMSHLPKQHTESLPKLDSHLVRTKATKCTKLFFPHPSMLQLPNKSKADAEADEEKAEEDEGEEEEEEEEEEEEEEEEEDGKEKEKEGRVVDGVPSEQMEPTRNDNGFLSLHDEGKEVPTDMLIDFNVGDICLSDLLNSDFSNTYNFSCTTSIACSDQPDPVFSDEALRDWMQTNLADETNASNNLHSLFFLDTTDHRLEQS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02741 391 Gene3D - 72 124 - -
Spst3g02741 391 Coils Coil 234 276 - -
Spst3g02741 391 SUPERFAMILY Homeodomain-like 70 166 IPR009057 -
Spst3g02741 391 MobiDBLite consensus disorder prediction 226 297 - -
Spst3g02741 391 Pfam Myb-like DNA-binding domain 125 170 IPR001005 -
Spst3g02741 391 Pfam Myb-like DNA-binding domain 72 119 IPR001005 -
Spst3g02741 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 119 IPR017930 -
Spst3g02741 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 174 IPR017930 -
Spst3g02741 391 FunFam MYB-related transcription factor 71 124 - -
Spst3g02741 391 CDD SANT 74 119 IPR001005 -
Spst3g02741 391 CDD SANT 129 170 IPR001005 -
Spst3g02741 391 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 68 269 - -
Spst3g02741 391 ProSiteProfiles Myb-like domain profile. 67 119 IPR001005 -
Spst3g02741 391 FunFam Transcription factor TT2 128 199 - -
Spst3g02741 391 MobiDBLite consensus disorder prediction 180 197 - -
Spst3g02741 391 ProSiteProfiles Myb-like domain profile. 120 170 IPR001005 -
Spst3g02741 391 MobiDBLite consensus disorder prediction 173 203 - -
Spst3g02741 391 SMART sant 124 172 IPR001005 -
Spst3g02741 391 SMART sant 71 121 IPR001005 -
Spst3g02741 391 Gene3D - 127 200 - -
Spst3g02741 391 MobiDBLite consensus disorder prediction 242 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02741 Spst-Chr3 76994225 76997430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02741 69 201 MYB Transcription Factor Family AT3G13540 58.108 4.23e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst3g02741 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02741 K09422 - gmx:100781908 422.165