Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02718 ATGGCACCGCTGATCTTGCATGGTGGCAAAACAAACAAAAATTCCTACAAGACACTCATTGCTGCTGAGTACGCTGGCGTCCAAGTTGAATTTGCACCAAATTTTGAGATGGGTGTCTCCAATAAAACTCCTCAATTTCTCCAGATGAATCCTATTGGCAAGGTTCCTGTTTTGGAAACACCCGATGGTTCAGTGTTTGAGAGCAATGCCATTGCTCGCTATGTTGCCCGGCTGAAGGGTGATAACACTTTGTACGGTTCTTCTTTGCTTGAATATGCCCAGATTGAACAATGGATTGATTTTTCATCATTTGAGGTAGATGCTAATATTATTAAGTGGTATGCCCCTAGAGTTGGACGTGGACCATACCTTCCTCCAGCTGAGGAGGCTGCCATATCTGCACTAAAGAGAGCTTTGGGTGCTTTGAACACTCACCTTGCCTCCAATACATACCTGGTTGGGCATTCTGTGACCCTGGCTGACATCATATTGACATGCAATTTGTATTTGGGTTTCACAAATATCCTGGTTAAGAGCTTCACCTGTGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAACCAAACTTCCGAAAGATATTTGGGCAGGTGAAGCAGACTGAGGCTGTTCCACCTGTTCAATCTGCAAAGAAGCCTTCCCAGCCAAAAGAAACTAAGCCCAAGGCCAAAGATGAACCAAAGAAGGAGACCAAAAAGGAGCCAGAGAAGCCCAAAGAAGCAGAAGCAGAAGAGGAGGCACCCAAACCCAAACCCAAGAATCCCCTTGATCTTCTCCCTCCAAGTCCAATGATTCTGGATGAGTGGAAAAGACTGTACTCCAACACCAAAACCAACTTCAGGGAAGTTGCTATCAAAGGATTTTGGGACATGTATGATGCTGAGGGATACTCTCTCTGGTTTTGTGATTACAAATACAATGATGAGAATACTGTTTCTTTTGTGACTTTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGACTTGGCTCGCAAGTATGCATTTGGAAAGATGCTTGTCATTGGTTCAAATCCACCATTTAAGGTGAAGGGGCTGTGGCTTTTCCGCGGGCAAGAAATCCCGCAATTTGTCATTGATGAATGCTATGACATGGAGCTTTACGAGTGGACGAAGGTTGACCTATCTGATGAAGCTCAAAAGGAGCGCGTCAATCAGATGATAGAAGATTATGAACCTTTTGAGGGCGAGGCTCTTTTGGACGCTAAGTGCTTTAAGTGA 1266 0.4447 MAPLILHGGKTNKNSYKTLIAAEYAGVQVEFAPNFEMGVSNKTPQFLQMNPIGKVPVLETPDGSVFESNAIARYVARLKGDNTLYGSSLLEYAQIEQWIDFSSFEVDANIIKWYAPRVGRGPYLPPAEEAAISALKRALGALNTHLASNTYLVGHSVTLADIILTCNLYLGFTNILVKSFTCEFPHVERYFWTLVNQPNFRKIFGQVKQTEAVPPVQSAKKPSQPKETKPKAKDEPKKETKKEPEKPKEAEAEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDAEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSNPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDLSDEAQKERVNQMIEDYEPFEGEALLDAKCFK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02718 421 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 261 421 IPR001662 GO:0003746|GO:0006414
Spst3g02718 421 MobiDBLite consensus disorder prediction 224 261 - -
Spst3g02718 421 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
Spst3g02718 421 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Spst3g02718 421 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 4 421 IPR044628 GO:0004364
Spst3g02718 421 Pfam Elongation factor 1 gamma, conserved domain 260 368 IPR001662 GO:0003746|GO:0006414
Spst3g02718 421 CDD GST_N_EF1Bgamma 6 78 - -
Spst3g02718 421 FunFam Elongation factor 1B gamma 3 75 - -
Spst3g02718 421 SUPERFAMILY Thioredoxin-like 1 86 IPR036249 -
Spst3g02718 421 SFLD Glutathione Transferase (cytosolic) 6 191 IPR040079 -
Spst3g02718 421 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Spst3g02718 421 CDD GST_C_EF1Bgamma_like 91 211 - -
Spst3g02718 421 FunFam Elongation factor 1 gamma 81 217 - -
Spst3g02718 421 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 261 421 IPR036433 GO:0003746|GO:0006414
Spst3g02718 421 Pfam Glutathione S-transferase, C-terminal domain 131 198 IPR004046 -
Spst3g02718 421 Gene3D Glutaredoxin 1 75 - -
Spst3g02718 421 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Spst3g02718 421 SUPERFAMILY eEF1-gamma domain 261 421 IPR036433 GO:0003746|GO:0006414
Spst3g02718 421 Gene3D - 81 217 - -
Spst3g02718 421 FunFam Elongation factor 1-gamma 1 261 421 - -
Spst3g02718 421 SMART EF1G_2 260 368 IPR001662 GO:0003746|GO:0006414
Spst3g02718 421 MobiDBLite consensus disorder prediction 213 270 - -
Spst3g02718 421 SFLD Main (cytGST) 6 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02718 Spst-Chr3 76787084 76789424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02718 4 421 Eukaryotic Initiation Factors Gene Family AT1G57720 74.163 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02718 K03233 - gmx:547637 738.028