Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02704 ATGAGCTTTCAGGACATCGAGGCTGGCCGGCCCTTCGGTTCCAAGCGCGGGTTGACCAACGGCAAGCAGGACCCTACGCAAGCGGTGGCTGCCGGAATATTCCAGATCAACACCGCCGTTTCCACCTTCCAGAGACTCGTCAACACCCTCGGAACCCCTAAAGACACTCCCGACCTCCGCGAGAAGCTCCACAAGACAAGACTACACATTGGGCAATTGGTGAAGGATACATCAGATAAACTTAAGCAAGCCAGTGACATTGATCACCATGCTGGTGTTAATGCAAGTAAGAAGATCGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAAGAGTTTCAAAAGGCACAACGTCTTGCAGCTGAAAGGGAAACAGCATACACTCCTTTTGTTCCCCAAGCAGTCCTTCCTTCGAGCTATACTGCTGGTGAAATAGATGTTAGTTCTGATAAGTCACCCGAAGAGCGTGCCTTACTTGTGGAATCAAGGAGACAGGAGGTTTTATTCTTAGATAATGAGATTGCCTTCAATGAGGCTATAATTGAGGAACGAGAGCAAGGCATTCAAGAAATACAACAGCAAATTGGTGAAGTTAACGAGATCTTTAAAGATCTTGCTGTGCTCGTTCATGAGCAAGGAACCATGATTGATGATATTGGCTCCAACATTGAGAACTCCCATGCAGCAACAGCACAAGCAAAATCTCAACTTTTAAAAGCTTCAAAAACCCAAAGATCAAATTCCTCTTTGACATGCTTGCTTTTGGTGATTTTTGGGATTGTGCTTCTGATCGTTATCGTATTGCATTTGCACGCGTTGACAATGAAGCTCCCTGTGCGTTACTTGATTGTTATTTTGACCTTCATCTGCACCTCAGTTTGCTACATCGAACGTGTTGGGTTTTCCATCGCGTACACAGTTGCTGCTGACAGTGTCGGGGTGAATCAATCGAGCAAAGGTACAATACTGTCCACCTTCTATTACGGATACGCCTGTTCTCAAATTCCCGGAGGATGGGCTGCTCAGAAAATCGGGGGGAGGAGGGTCCTGCTTCTTTCATTTCTGTTGTGGTCGTTGACTTGTGCACTACTTCCTCTAGATCCCAATCGCGTTATGCTTTTAGTCGTTGCTCGCTTGCTCGTTGGTGTAGCACAGGGTTTTATTTTCCCCTCCATTCACACGGTTCTAGCACAGTGGGTTCCCCCTCACGAGAGATCTAGATCCGTCTCTCTCACCACTTCTGGGATGTACCTAGGTGCGGCTCTGGGAATGCTTATTCTTCCTACTCTAGTCAAGTTCAGAGGTCCTCAATCTGTGGTCCTTGCGGAGGCGGCATTGGGTGCTTCATGGTCTTTACTTTGGTTCAAATACGCCACTGATCCCAAATCCACTGCCTCTGGTGTTGGGGAATCAGTCTTACCTGTCAATAAAAAAATTGATTCTCACAACAAAAAAGTACTTTCAGCCAAAATCCCCTGGGTCAAAATTTTAACCAGCTTCCCTGTGTGGGCGATCGTTGTCAATAATTTCACCTTTCACTATGCTCTATATGTGCTCATGAACTGGCTCCCAACCTACTTTGAATTGGGCCTTCAGCTTAGCCTGCAAGACATGGGTTCCTCTAAAATGATGCCATATCTCAACATGTTCCTGTTCTCCAACATTGGCGGTGTTGTTGCCGACTACTTGATAACCAGGAGAGTACTATCTGTCACCAAAACCAGGAAATTATTGAACACCGTTGGGTTCTTGATTGCTTCTCTTGCCTTGGTGGTGATTCCCAGTTTCAGAACTTCTGCTGGTGCTGTCTTCTGTTCATCTGTGGCTCTTGGCTTCTTGGCCCTTGGCAGGGCTGGGTTTGCAGTGAACCACATGGATGTTGCTCCGAGATACGCTGGAATAGTGATGGGTGTTTCTAACACTGCCGGTACGTTAGCTGGCATTGTTGGCGTCGACCTGACTGGGAAGCTCCTTGAAGCTGCTAAGGCTGCTAATTCTGATCTTTCAAGTCCAGAAAGCTGGAGAGCAGTGTTTTTCATTCCTGGATTTTTATGCATTTTTAGTTCTTTTGTGTTTCTACTATTTTCAACTGGGGAGAGAATTTTTGATTGA 2118 0.4618 MSFQDIEAGRPFGSKRGLTNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPDLREKLHKTRLHIGQLVKDTSDKLKQASDIDHHAGVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAGEIDVSSDKSPEERALLVESRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQAKSQLLKASKTQRSNSSLTCLLLVIFGIVLLIVIVLHLHALTMKLPVRYLIVILTFICTSVCYIERVGFSIAYTVAADSVGVNQSSKGTILSTFYYGYACSQIPGGWAAQKIGGRRVLLLSFLLWSLTCALLPLDPNRVMLLVVARLLVGVAQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAALGMLILPTLVKFRGPQSVVLAEAALGASWSLLWFKYATDPKSTASGVGESVLPVNKKIDSHNKKVLSAKIPWVKILTSFPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQDMGSSKMMPYLNMFLFSNIGGVVADYLITRRVLSVTKTRKLLNTVGFLIASLALVVIPSFRTSAGAVFCSSVALGFLALGRAGFAVNHMDVAPRYAGIVMGVSNTAGTLAGIVGVDLTGKLLEAAKAANSDLSSPESWRAVFFIPGFLCIFSSFVFLLFSTGERIFD 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02704 705 ProSiteProfiles Major facilitator superfamily (MFS) profile. 262 702 IPR020846 GO:0022857
Spst3g02704 705 SUPERFAMILY t-snare proteins 23 235 IPR010989 GO:0016020|GO:0016192
Spst3g02704 705 CDD SNARE_Qa 200 241 - -
Spst3g02704 705 SMART tSNARE_6 175 242 IPR000727 -
Spst3g02704 705 Pfam SNARE domain 216 268 IPR000727 -
Spst3g02704 705 Gene3D - 175 273 - -
Spst3g02704 705 PANTHER SOLUTE CARRIER FAMILY 17 276 702 - -
Spst3g02704 705 CDD SynN 23 157 IPR006011 GO:0016020
Spst3g02704 705 Pfam Major Facilitator Superfamily 290 652 IPR011701 GO:0022857|GO:0055085
Spst3g02704 705 CDD MFS_SLC17A9_like 286 698 IPR044777 -
Spst3g02704 705 ProSitePatterns Syntaxin / epimorphin family signature. 186 225 IPR006012 GO:0005484|GO:0006886|GO:0016020
Spst3g02704 705 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 242 IPR000727 -
Spst3g02704 705 Gene3D MFS general substrate transporter like domains 498 702 IPR036259 -
Spst3g02704 705 Gene3D - 19 133 - -
Spst3g02704 705 FunFam Syntaxin-22 like 20 133 - -
Spst3g02704 705 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Spst3g02704 705 FunFam Syntaxin-22 like 173 273 - -
Spst3g02704 705 Gene3D MFS general substrate transporter like domains 279 468 IPR036259 -
Spst3g02704 705 MobiDBLite consensus disorder prediction 1 23 - -
Spst3g02704 705 SMART SynN_4 13 127 IPR006011 GO:0016020
Spst3g02704 705 SUPERFAMILY MFS general substrate transporter 279 698 IPR036259 -
Spst3g02704 705 FunFam Probable anion transporter 7 280 469 - -
Spst3g02704 705 FunFam Probable anion transporter 7 501 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02704 Spst-Chr3 76566268 76577175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02704 278 705 Organic Solute Cotransporters AT5G44370 77.650 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02704 K08193 - gmx:100809973 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01221 2 10806473 10809253 Spst3g02704 3 76566268 76577175 PCT