Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02698 ATGCACTACATAAGTCGTTTCATCGCAGGGTTTACAATTGGTTTTGTGAGAGTGTGGCAGATAAGTTTAGTGACACTTGGTATTGTGCCCTTAATTGCCATTGCTGGTGGCCTTTATGCTTACGTCACCATTGGCCTTATTGGAAAAGTTCGGAAAGCATATGTAAGGGCTGGTGAAATCGCTCAAGAGGTGATAGGCAATGTGAGAACGGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATACAAAGCAGCTCTGATCAACACATATAGAAATGGTCGAAAAGCAGGTTTAGCAAAGGGTCTGGGATTAGGCTCCATGCATTGTGTTCTTTTCCTTTCATGGGCTCTGCTTGTTTGGTTCAACAGCATAGTTGTTCACAAGAATATCGCCAATGGGGGCGATGCTTTCACTACAATGCTCAACGTAGTCATTTCCGGCCTGTCACTAGGTCAGGCAGCACCAGATATTTCTGCATTTATCAGGGCAAAGGCATCAGCTTATCCCATTTTTGAGATGATAGAGAGGGACACCATGAGCAAGGTCAGCTCAGAAAATGGTCAAAAGTTAAGGAAAGTGGAAGGTCGCATCCAATTTAAGGATGTCTGTTTTAGTTATCCATCTCGTCCTGATGTGATTATCTTCAACAATTTTTGTCTTGAGATTCCTCAAGGGAAAATTTTAGCTCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACAGTTATATCATTGATTGAGCGCTTCTATGAACCAATTTCTGGTCAAATACTATTAGATGGGAACAACATCAGGGAACTTGATCTAAAATGGCTTAGACAACAAATTGGGCTGGTTAATCAAGAGCCTGCACTTTTTGCTACAAGCATCAGGGAGAACATACTGTACGGAAAAGATGATGCCACTCTTGAAGAAATAAATCAAGCTGTGATGCTCTCTGATGCTCAGTCTTTCATTAACAATCTTCCTGATGGATTAGATACTCAGGTTGGTGAGAGAGGGATACAACTATCCGGGGGACAGAAACAAAGGATTGCAATATCTCGTGCCATAGTTAAGAATCCATCTATTCTTTTATTAGATGAGGCAACCAGTGCTCTGGATGCAGAGTCTGAGAAAAGTGTACAGGAGGCTCTTGATCGTGTCATGATTGGTAGAACCACCGTGATCGTTGCACACAGACTTTCTACCATTAGGAATGCAGATATGATCGTTGTTATTGAGGGAGGGAAGGTGGTGGAAATTGGAAATCACGAGGAACTCATTTCCGACCCAAATAATGTATATGCATCTCTTGTTCAAATCCAAGAAACAGCCTTTTCTCATGGCAACCTTTCTGTGGATCCTTACTTGGGAGGCTCATCAAGACGCCTAGGAGAGTCATCATCCCGCACAACAAGCTTTCGTGGTAGTTTTCGCTCAGACAAAGAATCTACTAGCCGAGCATTGGGTGATGGAGTAGAAACTGTTGGAAGTTCAACGCATGTCTCGGTAAGAAGACTATATTCCATGATTGGTCCAGACTGGCTTTATGGTGTTTTTGGAACCTTGGGTGCATTTATTGCTGGAGCACAGATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCTTATTACATGGATTGGGACACAACACGTCATGAAGTCAAAAAAATTGCTCTCCTATTCTGTGGGGCAGCAATTTTAACCATCATTGCTCATGCTATTGAACATCTTTCCTTTGGAATCATAGGGGAACGACTTACCCTTCGTGCAAGAGAAAAAATGTTTTCCGCTATTTTGAAGAGTGAAATTAGTTGGTTTGATGACATAAACAACACAAGTTCTATGCTTTCATCACGGTTAGAGACCGATGCAACATTTTTAAGAACTATAATTGTTGATCGTTCAACGATTCTTCTGCAAAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCATGTTGAACTGGAGGATCACGCTTGTTGTACTGGCCACGTACCCTTTGATCATTAGCGGTCACATTAGCGAGAAACTATTCATGCAAGGCTTTGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCTGGGGAGGCTGTGAGTAATATCCGCACTGTGGCTGCGTTTTGTGCTGAACAAAAGGTCCTTGATCTTTATGCTAATGAGCTTGTGGAGCCTTCAAAACGTTCATTCAACCGGGGTCAAATTTCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGATCTGTGTTGATGGAAAAAGAGCTTTCTAGCTTCAAATCAATTATGAAGGCGTTTATGGTTTTAATTGTAACAGCACTAGCTATGGGGGAGACTTTGGCACTGGCACCTGACCTTTTGAAAGGAAATCAAATGGTTGCATCAATTTTTGAAGTGATGGATAGAAAAACAGGAATATTGGGTGATGTTGGAGAAGATTTGGAGACAGTTGAAGGAAGAATTGAGTTAAAAAGAATCCATTTCAGCTATCCTTCAAGGCCAGACGTGGTTATCTTCACTGATTTCAATCTTACAGTGCCCGCAGGAAAGAATATTGCCTTGGTGGGGCATAGTGGTTGTGGTAAAAGTTCAGTCATCTCCCTTATACTCAGATTTTACGATCCAACATCTGGGAAGGTGATGATTGATGTGATTCATCAAATCATTACAGGAAAAGACATCAAGAAACTCAATTTGAAATCCCTTAGGAAACATATTGGTCTAGTGCAACAAGAACCTGCTCTTTTTGCAACATCAATATATGAAAACATTCTTTATGGAAAGGAAGGAGCTTCAGAAGCTGAAGTGATTGAAGGTGCTAAACTTGCCAATGCTCATAGCTTTATCAGTGCTCTTCCTGAGGGCTACTCCACCAAAGTAGGTGAGAGAGGAGTTCAACTGTCTGGTGGCCAGAAACAAAGGGTAGCTATTGCTAGGGCTGTCTTGAAAAACCCTGAAATATTGCTGCTAGATGAAGCCACCAGTGCCCTGGATTTGGAGTCAGAGCGTGTGGTGCAACAAGCTCTAGACAAATTGATGCAGAACAGAACAACAGTTGTAGTGGCACATAGGCTATCCACAATAAAAAATGCAGACCAAATAGCAGTTTTAGAGGATGGTAAGATAATTCAGCGAGGGATTCATTCAAGACTTGTAGAGATCACAGATGGAGCATACTACAAATTAGTCAGCCTTCAACAACAAGAACAACAAGTACAAGAACATTTTGATGGATAA 3273 0.4167 MHYISRFIAGFTIGFVRVWQISLVTLGIVPLIAIAGGLYAYVTIGLIGKVRKAYVRAGEIAQEVIGNVRTVQAFAGEERAVRSYKAALINTYRNGRKAGLAKGLGLGSMHCVLFLSWALLVWFNSIVVHKNIANGGDAFTTMLNVVISGLSLGQAAPDISAFIRAKASAYPIFEMIERDTMSKVSSENGQKLRKVEGRIQFKDVCFSYPSRPDVIIFNNFCLEIPQGKILALVGGSGSGKSTVISLIERFYEPISGQILLDGNNIRELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEEINQAVMLSDAQSFINNLPDGLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMIGRTTVIVAHRLSTIRNADMIVVIEGGKVVEIGNHEELISDPNNVYASLVQIQETAFSHGNLSVDPYLGGSSRRLGESSSRTTSFRGSFRSDKESTSRALGDGVETVGSSTHVSVRRLYSMIGPDWLYGVFGTLGAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKIALLFCGAAILTIIAHAIEHLSFGIIGERLTLRAREKMFSAILKSEISWFDDINNTSSMLSSRLETDATFLRTIIVDRSTILLQNVGLVVASFIIAFMLNWRITLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEQKVLDLYANELVEPSKRSFNRGQISGIFYGISQFFIFSSYGLALWYGSVLMEKELSSFKSIMKAFMVLIVTALAMGETLALAPDLLKGNQMVASIFEVMDRKTGILGDVGEDLETVEGRIELKRIHFSYPSRPDVVIFTDFNLTVPAGKNIALVGHSGCGKSSVISLILRFYDPTSGKVMIDVIHQIITGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVIEGAKLANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDLESERVVQQALDKLMQNRTTVVVAHRLSTIKNADQIAVLEDGKIIQRGIHSRLVEITDGAYYKLVSLQQQEQQVQEHFDG 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02698 1090 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 199 435 IPR003439 GO:0005524
Spst3g02698 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 437 IPR027417 -
Spst3g02698 1090 MobiDBLite consensus disorder prediction 456 480 - -
Spst3g02698 1090 Gene3D - 823 1079 IPR027417 -
Spst3g02698 1090 Gene3D - 189 438 IPR027417 -
Spst3g02698 1090 Gene3D ABC transporter type 1, transmembrane domain 470 683 IPR036640 GO:0005524|GO:0016020
Spst3g02698 1090 PANTHER ABC TRANSPORTER B FAMILY 2 441 IPR039421 -
Spst3g02698 1090 CDD ABC_MTABC3_MDL1_MDL2 199 437 - -
Spst3g02698 1090 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 833 1076 IPR003439 GO:0005524
Spst3g02698 1090 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02698 1090 Pfam ABC transporter transmembrane region 515 786 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02698 1090 Pfam ABC transporter transmembrane region 2 148 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02698 1090 Gene3D ABC transporter type 1, transmembrane domain 747 1085 IPR036640 GO:0005524|GO:0016020
Spst3g02698 1090 FunFam ABC transporter B family member 19 189 438 - -
Spst3g02698 1090 ProSitePatterns ABC transporters family signature. 338 352 IPR017871 GO:0005524|GO:0016887
Spst3g02698 1090 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 514 800 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst3g02698 1090 Pfam ABC transporter 853 1007 IPR003439 GO:0005524
Spst3g02698 1090 SUPERFAMILY ABC transporter transmembrane region 500 814 IPR036640 GO:0005524|GO:0016020
Spst3g02698 1090 SUPERFAMILY ABC transporter transmembrane region 4 177 IPR036640 GO:0005524|GO:0016020
Spst3g02698 1090 ProSitePatterns ABC transporters family signature. 979 993 IPR017871 GO:0005524|GO:0016887
Spst3g02698 1090 Pfam ABC transporter 218 366 IPR003439 GO:0005524
Spst3g02698 1090 SMART AAA_5 860 1070 IPR003593 GO:0016887
Spst3g02698 1090 SMART AAA_5 226 420 IPR003593 GO:0016887
Spst3g02698 1090 CDD ABC_6TM_Pgp_ABCB1_D1_like 2 172 - -
Spst3g02698 1090 FunFam ABC transporter B family member 4 823 1085 - -
Spst3g02698 1090 CDD ABC_MTABC3_MDL1_MDL2 833 1075 - -
Spst3g02698 1090 CDD ABC_6TM_Pgp_ABCB1_D2_like 503 818 - -
Spst3g02698 1090 Gene3D ABC transporter type 1, transmembrane domain 2 440 IPR036640 GO:0005524|GO:0016020
Spst3g02698 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 827 1078 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02698 Spst-Chr3 76471794 76476935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02698 507 1084 Calmodulin-binding Proteins AT2G36910 41.397 2.21e-123 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02698 K05658 - gmx:100809752 1892.09