Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02694 ATGACAGGGTATTGCCCCTTTGGGAACAAATGCCATTTTGCTCATGGTGCCACAGAGTTGCACAGATATGGAGGGGGGCTTATGGAGGGAGAGAGCAGAGATGCTGCTTCTGTGGTTGGCAGTGACACAAATAAGGGAGTGGCTTCAAAAGCTTCTGCCGATAATGTGGTTGCAGCGGTTACTCCGGTTGCTCATTCTGATGTGTATCATATTGGAGTCCCTTCACAAAGGCCTTCTTCCATTGTGATTCAGAGGCCAGGGCAGAGAACTCATCAGAAGTGGAAAGGTCCAGATAAAATCAGTAGGATATATGGTGATTGGATCGATGACATCGAATAG 339 0.4749 MTGYCPFGNKCHFAHGATELHRYGGGLMEGESRDAASVVGSDTNKGVASKASADNVVAAVTPVAHSDVYHIGVPSQRPSSIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02694 112 SUPERFAMILY CCCH zinc finger 2 21 IPR036855 GO:0046872
Spst3g02694 112 ProSiteProfiles Zinc finger C3H1-type profile. 1 18 IPR000571 GO:0046872
Spst3g02694 112 Gene3D - 1 22 - -
Spst3g02694 112 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2 16 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02694 Spst-Chr3 76409853 76412533 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Spst3g02694 zf-CCCH 4.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02694 - - gmx:100788208 222.246