Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02693 ATGCTCTCAAACTCCTATCTCATCCATGCAAACAACCAAGAACGTACGGTCCGGAATAAGCCACTCTCCGGCCAACTCAACCAGCGGAAATTTCCCTTCCCTCTCGTCCTCTGGGCAATGTCTTTGGCGGAGTACGACCCGGCACCGGTCGCGCCGCCGTACAACACCCCACCAGCGCTGATTGCCTTTGCTCTGGGTGTGTTGGTGGTGTGCTTCGTGACATTCAGCATCGTGTACTTGTGCAAGTACTGTTTCACGAGCATGATCCAGACGTGGGCCTTCCAACGCACCGCTTCGGGTTCCATCATTCGTCTCACGCCGCACAGATCGCCTCCGAGAGGCATTGACCCTGCGCTGCTGCAATTGTTCCCGACGTTCCCCTACTCCTCCGTGAAGGACCTCCGGAAGGATCAGAGGTACAGTCTGGAATGCGCTATCTGTTTGGTGGAGTTCGAGGACGACAGCATGCTTCGCTTCTTGACCCTCTGCTGCCATGTCTTCCACCAGGACTGCATCGATCTCTGGCTCCGCTCCCACAAAACTTGCCCCGTTTGCCGCCGAGACCTTGAATCTTGCCCCGACGAAACGCTCAAACCTGTCGACGTTGTCGTTTCCTCAACCAGCGTTCTCAGTTTTGTGAGTCTACCCCAAGTTGACAATTGGATTTCATCCATGGATCCTACTCTGCCTAATCCCTCCTTCAACCCCAACAAGTATCTCAAAGAACAATTTGTCAGCAACTTGAGCGGATCCTCAATGCCCGAAATCGTGGCACTTACAGTGATTATTCCGGTTCTGATTCTTATTCGTCACTCCATCTCCTCCGTTTCCATTACCGGTGCCTCCCTGAAGAAGAAAAATGATGATGCACCTTCCAGTAAAAAGAATTTCAAATCATACTTAGCCACATTGTCTCTGGACTTTCTTGTTATTGTCGTTCCTATGCTCTTATTTTTCACTGTACTAGCAAACTGGACCTATGTCTTCGCATGTTTGTTCGCTATCTTAACACTACTATATATTGCAACCAAGAGGTCTGGTGGTTCATCTTCTTTTGAAGGAGAGCCCACTTCTCTTCGGGCATATGTTACTTCATACAGGGTTCTTGTGATGATTATAACATTCTTGTGCATCTTGGCTGTTGACTTCAAAATATTTCCTAGAAGATATGCAAAGACTGAAACTTATGGAACGAGTTTGATGGATCTTGGAGTTGGAGCATTTGTCTTAGCAAATTCACTAGTTTCTCGGCAAGCACGGAATATGGGATCAGTAAGCTGGAAGACTGCAATAGCTTCAACTAGTCCACTGATCATCTTAGGATTTCTTCGTCTTGCTACAACGACTGGTGTGGATTATCAGGTGCATGTTGGTGAATATGGTGTGCATTGGAATTTCTTCTTCACACTTGCTGCTGTGTCAATCCTTACTTCCTTTATTAATATTGCTCCTCAATATTGTGGAATTATTGGTTCACTTGTTCTAGTAGGGTACCAGTTCTGCTTGGTGCAAGGTTTAAATCTTTATTTGCTTTCTAACGAAAGAGGAATGGATATATTAAGTCAAAACAAGGAAGGAATTTTTAGTATATTTGGATACTGGGGTATGTACCTTCTTGGCGTTCATCTAGGAAACTCTCTTATCTTTGGAAGCCATTCTTCTGGATTTAGAAGTAGCAGATGGGTGCGGATGAGAGTTTGGGTTCTCTCTATCCTGTTTTGGTTATTAACCGTGCTACTGGATAGGCATGTTGAAAGAGTTTCACGGAGAACATGCAACCTTCCATATGTTACTATGGTATTGGCGGACAATCTCCAGCTGTTATCAATTCTAATGCTGGCTGATCTTGTTCCTGGAAGGAAAACTTCAATACTTGAAGAAGCATTCAATAGGAACTTACTGGCTACATTTCTATTGGCAAATATTCTCACGGGGTTGGTAAACTTGTCTGTTGATACCCTGTCCGCGTCATCAATCACAGCCCTTGTTATCTTGTTTGTCTATGCTTATATTTTATCAATTGTAATTGGTATTGTAGATTATTTTGGTATTAGATTAAAATTTTGGTGA 2070 0.4469 MLSNSYLIHANNQERTVRNKPLSGQLNQRKFPFPLVLWAMSLAEYDPAPVAPPYNTPPALIAFALGVLVVCFVTFSIVYLCKYCFTSMIQTWAFQRTASGSIIRLTPHRSPPRGIDPALLQLFPTFPYSSVKDLRKDQRYSLECAICLVEFEDDSMLRFLTLCCHVFHQDCIDLWLRSHKTCPVCRRDLESCPDETLKPVDVVVSSTSVLSFVSLPQVDNWISSMDPTLPNPSFNPNKYLKEQFVSNLSGSSMPEIVALTVIIPVLILIRHSISSVSITGASLKKKNDDAPSSKKNFKSYLATLSLDFLVIVVPMLLFFTVLANWTYVFACLFAILTLLYIATKRSGGSSSFEGEPTSLRAYVTSYRVLVMIITFLCILAVDFKIFPRRYAKTETYGTSLMDLGVGAFVLANSLVSRQARNMGSVSWKTAIASTSPLIILGFLRLATTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSFINIAPQYCGIIGSLVLVGYQFCLVQGLNLYLLSNERGMDILSQNKEGIFSIFGYWGMYLLGVHLGNSLIFGSHSSGFRSSRWVRMRVWVLSILFWLLTVLLDRHVERVSRRTCNLPYVTMVLADNLQLLSILMLADLVPGRKTSILEEAFNRNLLATFLLANILTGLVNLSVDTLSASSITALVILFVYAYILSIVIGIVDYFGIRLKFW 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02693 689 Pfam GWT1 522 648 IPR009447 GO:0006506|GO:0016020|GO:0016746
Spst3g02693 689 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 192 IPR013083 -
Spst3g02693 689 SUPERFAMILY RING/U-box 135 191 - -
Spst3g02693 689 PANTHER PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN 234 688 IPR009447 GO:0006506|GO:0016020|GO:0016746
Spst3g02693 689 FunFam E3 ubiquitin-protein ligase ATL6 104 192 - -
Spst3g02693 689 SMART ring_2 144 185 IPR001841 -
Spst3g02693 689 Pfam Ring finger domain 143 186 IPR001841 -
Spst3g02693 689 CDD RING-H2_EL5-like 143 186 - -
Spst3g02693 689 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02693 Spst-Chr3 76400491 76408302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02693 47 190 C3H Transcription Factor Family AT2G35420 38.356 2.98e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02693 K05283 - gmx:100811353 800.816