Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02687 ATGAGAAGAGAAGAAGGAGATGGATTCCTTACCAAGAACGCATCTGTCGGGTTTGGGTTGGGAGCTAGGTTTGGTCGTGTGAGACGACTTTGTGTTGTGTGGATAAGAACGACCCTCTTCTCTCTCATACATACTCTTCCTTTCCCCATCTCTCTCCCTCTCTCAAGCAAACATCTTCTACCGCCTCCAATTCCTACAAGAACCCATTCCCTCCCACACCGCCCCAAAATCTCACTCTCCCCCTTCACACCCACCTCTTCCTTCTTTCTCTTCTTCAAAATAACACACTCTCCCCCACTTCCTCAAATTCACAACACCACACATAACCTTTCTCCCAACACTCCTTTCAAGCTGGCGTTCCAAAACCAAGGCACCACTGTCCGAGAAATCAAGCCCAAGAACCGCAGAATCATGGTAAGACAATCAACCACTTTCACTCAACTTCTTCTTTCATGCACCGGTTCTGGAGGACCTGATGACGAGGACAACCGGTGGCCACCGTGGCTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGTAAGTTGCATGCTGACTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCTCTCTGCTCCCTCTGCCTCGCTTACCACAAAGATCACCGTGCTATTCAGATAAGGAGGTCCTCATACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGAGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTTTTTTTGAATGAAAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACCAACACTTGTGAAGTCTGTGAGCGCAGCCTTCTTGATTCATACAGATTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAAGTTGGAGAAGAAGAAAAAGTCAGCAACAATGGCATCAGACTCGGAGGATTCATACAGCAGCAACGGCAGCCATGGGAAGAACAACAGCAACAAGGTGCAGAGTTTCACACCGTCCACACCGCCACCAACTTCCGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCGCACCGTGCCCCGATGGGAGGACTAGTCATAGAATACTAG 1104 0.4846 MRREEGDGFLTKNASVGFGLGARFGRVRRLCVVWIRTTLFSLIHTLPFPISLPLSSKHLLPPPIPTRTHSLPHRPKISLSPFTPTSSFFLFFKITHSPPLPQIHNTTHNLSPNTPFKLAFQNQGTTVREIKPKNRRIMVRQSTTFTQLLLSCTGSGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRKLEKKKKSATMASDSEDSYSSNGSHGKNNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02687 367 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 159 360 - -
Spst3g02687 367 MobiDBLite consensus disorder prediction 310 344 - -
Spst3g02687 367 MobiDBLite consensus disorder prediction 301 367 - -
Spst3g02687 367 CDD Bbox2 181 220 - -
Spst3g02687 367 Pfam PLATZ transcription factor 221 292 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02687 Spst-Chr3 76326663 76328760 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst3g02687 PLATZ 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02687 - - pvu:PHAVU_003G2848001 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02687 3 76326663 76328760 Spst3g02687 3 76326663 76328760 ECH
Spst3g02687 3 76326663 76328760 Spst3g02687 3 76326663 76328760 PCT