Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02679 ATGGGAGATGTGGCAAAGGACCTTGCAGCTGGGACTGTTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACTATCAAGGTCAAGCTCCAAAGCCAGCCTGTACCACTCCCTGGTCAGCTTCCCAAGTATTCGGGCGCATTTGATGCTGTCAAGCAGACAATAGCAGCAGAAGGACCAAGGGGTTTATACAAAGGTATGGGTGCCCCTCTTGCTACAGTAGCAGCCTTCAATGCTGTCCTGTTTACAGTGAGGGGACAAATGGAAACATTAGTGAGGTCCCATCCTGGTGCCCCCCTCACAGTGAATCAGCAAGTTGTCTGTGGAGCTGGAGCTGGAGTTGCTGTTTCGATTCTTGCATGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCACAAAGTGCGCTTGCTGGCTCTGAAACAGCTACTGTGGCTATTAAATATGGAGGACCCATGGATGTGGCCAGGCATGTTCTCAGATCAGAAGGGGGCATGAGAGGTCTTTTCAAGGGCTTGGTTCCCACTATGGGACGAGAGATACCAGGAAATGCTATAATGTTTGGTGTATATGAAGCATTAAAGCAAAAGTTTGCAGGAGGTACTGATACATCTGGCCTAGGCAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCTTTCTGGTTCCTTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAGAAACCCAAAATTTTCGGGTTCGTTTGATGCATTCAGAAAGATTCGAGCTTCAGAGGGCTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCTATGGCCCGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACCAGATCAGCTCTGGCATGA 894 0.4821 MGDVAKDLAAGTVGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMETLVRSHPGAPLTVNQQVVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAIKYGGPMDVARHVLRSEGGMRGLFKGLVPTMGREIPGNAIMFGVYEALKQKFAGGTDTSGLGRGSLIVAGGLAGASFWFLVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02679 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Spst3g02679 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Spst3g02679 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Spst3g02679 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Spst3g02679 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Spst3g02679 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Spst3g02679 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Spst3g02679 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Spst3g02679 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Spst3g02679 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02679 Spst-Chr3 76233776 76234984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02679 22 296 Antiporters AT1G79900 33.096 5.68e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02679 K15109 - gmx:100791908 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02679 3 76233776 76234984 Spst3g02679 3 76233776 76234984 ECH