Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02650 ATGGTGCCACCACCAGAAGGCATACCACCAACACAGAAAGACCATGAGGTAACTGAGGGCCGCAAAATGACGAGGCCAGCACCTGAACAAGGTGTGAAGTGTCCAAGATGTGACTCACCCAACACCAAGTTCTGCTACTATAACAACTACAGCCTCACTCAGCCCAGGCACTTCTGCAAGACTTGCAGGAGGTACTGGACAAACGGTGGTGCCTTGCGCAACGTTCCAATAGGAGGTGGTTGCAGGAAGAACAAAAAGGTGAAACCTTCTTCCTCTGCGTCATCCTCCTCCAGATTTTCGTGTGACCCCAAAGACTTCAATTTTCACGGTCTCACAGGCCCACCTTCTGCTGACTTTAACCTCAGCGCGTTACCCTTTCCCTCGAGGCTCAGCACTTTCAGCACTCAACACCTTCCGACACCCCCTACTGGGGTGTTCAACCAGTTCTCTTCTTTTGGGGACGTTTCATCGGCTTCAACCAGTTCTCTTTCTGTTTTGTCTTCCTTCCAACTTGACCCCCCTGGTGCTGTTTCAAACCCTCTCTTGGGTCTTGTTCCGCCCAACCCTGACCTCTGGGGGTTAGGTCGGTCAGAAAGGGCCTCACTGTCTGATCCATTGAACAGTGCAATGCAAACGCTGCAGACTATGGAAACCATGAACGTTCACAGCAGCCTTGCCTCTTCAATTGAGTCGCTGAGCAACATCAACCAGGACTTGCACCTGAAGCTGCAGCAGCAGCGGATGACGACAATGATGTTTGGTGGGGACAGCCAGAAAGGTGAGAGCAGCGTTGCGCCGAATGGGTATGAGAATCAGAAACTGCTACAACCCGTTTCGTTTCAGAACCTTGCGATTTCGAAGCCAGAGAATTTGCCAGCTGGCAGTTCCATAAATGGAGGCCCAAGTGGGGAGACAGTTACTGCAGCTTCCACTGAATGGTTTTTTGGGAATTCCTTTTCTTCAGTGTCTCCTTCAACAAGCAATGGTGGTGTCAATGTTAACCACATTAACAACGGTGCACACAACAACTGGAGTGGTGCCCTTGCCTGGGGGGATTTGCAGCAGCAACCATACAGCGCTTTGCCCTAG 1089 0.5124 MVPPPEGIPPTQKDHEVTEGRKMTRPAPEQGVKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGALRNVPIGGGCRKNKKVKPSSSASSSSRFSCDPKDFNFHGLTGPPSADFNLSALPFPSRLSTFSTQHLPTPPTGVFNQFSSFGDVSSASTSSLSVLSSFQLDPPGAVSNPLLGLVPPNPDLWGLGRSERASLSDPLNSAMQTLQTMETMNVHSSLASSIESLSNINQDLHLKLQQQRMTTMMFGGDSQKGESSVAPNGYENQKLLQPVSFQNLAISKPENLPAGSSINGGPSGETVTAASTEWFFGNSFSSVSPSTSNGGVNVNHINNGAHNNWSGALAWGDLQQQPYSALP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02650 362 MobiDBLite consensus disorder prediction 78 99 - -
Spst3g02650 362 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 247 IPR045174 GO:0003700|GO:0006355
Spst3g02650 362 Pfam Dof domain, zinc finger 31 86 IPR003851 GO:0003677|GO:0006355
Spst3g02650 362 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
Spst3g02650 362 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
Spst3g02650 362 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02650 Spst-Chr3 75863688 75864776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02650 2 95 C2C2-Dof Transcription Factor Family AT5G65590 59.406 5.90e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Spst3g02650 zf-Dof 3.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02650 - - gmx:102663483 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02650 3 75863688 75864776 Spst3g02650 3 75863688 75864776 PCT