Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02633 ATGGAGAAATTAGACAAAAAAGGAAAAGAAATGAAAGAAAAGAAATGGTCTCGGAAACTCGAGTTACCGATGATAATGGGCAGCCAGAAGAAAGAGGTTGCATTCGACGACGACGTATTATTGGCGTCGCCGAGGGATGTGTTCGGGGTTCCTGTTTCGGGGACGGATTCGGACAGCACGGCGAGCAGCATCTACTGTGGGCCTGCGTCGCCCGAAATGGGCCCAGACCGGGCCCTAGCGAAAGACGGGCAGACCCAGCAATGGAAGACGATGATGGACGTGTTGAGGTTAAAGTCCGTTAGAAGATTCTCGTCCATTCCTCTGCTTACGGCGAGTTACGAAATTTCGCGGCGGAGCCTGAGGAACAAGCTGAGCCGTATTCGACCCACCAATGAAGACGATGATTTGGATGCTGCTATTGACATTGACGGCATTCCCACCAAGCCTTCTTGGAGGAACTTCAATTACGCTGACCTCGCCGCTGCAACCGATGATTTCAACCCTGAGAACATGATTGGAAAAGGTGGTCATGCTGAAGTGTATAAAGGATGCTTACCAGATGGTCAAGTTGTAGCAGTAAAGAGGCTAACGAGGAACGACGAGGACAGAGCTGGCGATTTCTTGTCAGAACTTGGAATAATAGCTCACGTTAACCACCCCAATGCAACTCGCTTGATTGGGTTTGGAATCGACCAAGGTCTCTACTTTGTTCTCCAATTGGCCCCACATGGCAGCCTTGCCTCTATGCTCTTTGGTGCAGCTCTGCCTCTATCTCTCACTTCTCATTTCGTCTCTTCATTTTTTAATGCAGAATCAATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCATCATGTTGTCTTCCCAATAGAAGGCACGTTCGGGTAG 900 0.4922 MEKLDKKGKEMKEKKWSRKLELPMIMGSQKKEVAFDDDVLLASPRDVFGVPVSGTDSDSTASSIYCGPASPEMGPDRALAKDGQTQQWKTMMDVLRLKSVRRFSSIPLLTASYEISRRSLRNKLSRIRPTNEDDDLDAAIDIDGIPTKPSWRNFNYADLAAATDDFNPENMIGKGGHAEVYKGCLPDGQVVAVKRLTRNDEDRAGDFLSELGIIAHVNHPNATRLIGFGIDQGLYFVLQLAPHGSLASMLFGAALPLSLTSHFVSSFFNAESISDFGLAKWLPDKWAHHVVFPIEGTFG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02633 299 SUPERFAMILY Protein kinase-like (PK-like) 151 298 IPR011009 -
Spst3g02633 299 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Spst3g02633 299 Gene3D Phosphorylase Kinase; domain 1 140 238 - -
Spst3g02633 299 Pfam Protein kinase domain 169 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02633 299 PANTHER OS08G0249100 PROTEIN 268 299 IPR046958 -
Spst3g02633 299 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 141 240 - -
Spst3g02633 299 ProSiteProfiles Protein kinase domain profile. 166 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02633 Spst-Chr3 74982800 74984769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02633 153 299 Receptor kinase-like Gene Family AT1G29740 33.889 1.12e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst3g02633 Pkinase 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02633 - - gmx:100794225 390.963