Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02630 ATGGCCGGTGCCACAAATTGGCTTACGTTTTCGTTGACTCCCGTGGAAATGCTCAGATCCCCCGACTCTTCCCCTCACTGCATCCTCGATAACTTTTATGCCACCAATGGTAACGCCTCTTCGCTAAACCCCTCTCCTGTTATGTTTTACTCAATACCCTTTTGGAATTGGTGGACAAGTTCCAAGGTTTTGATGGATTCTGAGAGTGGAAACCAACCACTCGTGGTGCCGAAAGTGGAAGATTTTTTTGAGAACCAAACGGAGACGCAACAAGACGATTCTTCGCTGACCCAAATTTACGACCATGACTCTGCCTCTGTTTACTTCGGCGACCAACAGGATCTGAACGCCATTCCCGGGTTTAAAGCGTTCTCTGCGACCAACTCCGGCTCCGAGTTGGATGACTCAGCCTCGGACAAGACCACTCGGGTTGCACCTGTTGAGTTAGGGGCTCACTCGAGCGAGTCTTGCAAAGGTGCTTTGTCTTTATGTGATGCTGTTGCACATGACAAGGCCAAAGTTGCGGTGGACTTTGATACGCCGAAGAAGGTTGCTCATACCTTCGGCCAGCGAACTTCAATATACAGAGGAAAGCTGGGTTTGACCACAACATCATTTCTCACTCTCTATATTGAAATTTGCACTTACATGAATGTGGAGGGGAGTCCCATGTTGGCTGAAAGGTTGTTCACAGTGTGTCCGGTTAAATTTGATTTTTTCTTGGCTTTTTCTTTGCATGGAATGTGGCATTGTGCACTTCATGACTGTGTCATCCGTCCTTTGACTGTTCCTACAGTGTACTTGGGTGGATATGACAAAGAAGAAAAGGCTGCAAGAGCTTATGATTTAGCAGCTATCAAGTACTGGGGACCAACAGCAACCACTAACTTTCCTTTGATACTAGTTAAACTCAAATTTGGTCTCCCTTGGTCTCAAAGAAAACATGCATTCGTTAGCATCCGAAAAGTGGAGGCTAAGGTTCTAAAGAGTCTCAATGAAGTTGAGCAGATTTGCAATTATACAAAGGAAGTGGAGGAGATGAAACATACAGGAAAGCAAGAATTTATTGCATCACTGCGAAGGAAAAGTAGTGGATTTTCACGGGGAGCCTCCGCATACAGAGGTGTTACGAGGCATCATCAACAGGGTAGATGGCAAGCGAGAATTGGCCGAGTTGCGGGAAACAAGGATCTATACCTGGGAACATTTGGCAAGTTCATAGAATATCTTGCTTTAAGACTGTGTTTGGACATGTTTAATGGATTACCAACTGAAGAGGAAGCAGCTGAGGCATATGATATTGCAGCCATAAAGTTCAGAGGTGCAAGCGCTGTAACCAATTTTGAGATGAGCAGATATGATGTGGAGAATATATTGAATAGCTCTCTTCCAGTTGGTGGGGTAGCAAAACGCTTGAAGCTTTCCCCGGAATTGGAGAACAAAGCTCTTGTTGGTAGTACTAATGAACAACCTCAGCGCACAAACGAGAGTAGTACCATCAATTTCTCGGCCATTCAGCCAGTTGCATCCATGCCATATGATTCTGTAAACACGGGTTACCCTCACAACCTCTTCCACCATTTCCATCCTTCCAACAGTGGAAGTAGCACAGCTCATGAGTCTGCTGCAATGACCAATGCAACTGCACTGACCATCCTTCCACCACCACCACCAGCAGTTCCTGGAGTATCAAATAAAAAGATATATGTTTAA 1713 0.4536 MAGATNWLTFSLTPVEMLRSPDSSPHCILDNFYATNGNASSLNPSPVMFYSIPFWNWWTSSKVLMDSESGNQPLVVPKVEDFFENQTETQQDDSSLTQIYDHDSASVYFGDQQDLNAIPGFKAFSATNSGSELDDSASDKTTRVAPVELGAHSSESCKGALSLCDAVAHDKAKVAVDFDTPKKVAHTFGQRTSIYRGKLGLTTTSFLTLYIEICTYMNVEGSPMLAERLFTVCPVKFDFFLAFSLHGMWHCALHDCVIRPLTVPTVYLGGYDKEEKAARAYDLAAIKYWGPTATTNFPLILVKLKFGLPWSQRKHAFVSIRKVEAKVLKSLNEVEQICNYTKEVEEMKHTGKQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFGKFIEYLALRLCLDMFNGLPTEEEAAEAYDIAAIKFRGASAVTNFEMSRYDVENILNSSLPVGGVAKRLKLSPELENKALVGSTNEQPQRTNESSTINFSAIQPVASMPYDSVNTGYPHNLFHHFHPSNSGSSTAHESAAMTNATALTILPPPPPAVPGVSNKKIYV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02630 570 SMART rav1_2 259 304 IPR001471 GO:0003700|GO:0006355
Spst3g02630 570 SMART rav1_2 372 455 IPR001471 GO:0003700|GO:0006355
Spst3g02630 570 SUPERFAMILY DNA-binding domain 371 451 IPR016177 GO:0003677
Spst3g02630 570 CDD AP2 266 298 IPR001471 GO:0003700|GO:0006355
Spst3g02630 570 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 78 517 - -
Spst3g02630 570 ProSiteProfiles AP2/ERF domain profile. 372 449 IPR001471 GO:0003700|GO:0006355
Spst3g02630 570 Gene3D AP2/ERF domain 244 300 IPR036955 GO:0003700|GO:0006355
Spst3g02630 570 Gene3D AP2/ERF domain 372 451 IPR036955 GO:0003700|GO:0006355
Spst3g02630 570 SUPERFAMILY DNA-binding domain 262 299 IPR016177 GO:0003677
Spst3g02630 570 CDD AP2 371 451 IPR001471 GO:0003700|GO:0006355
Spst3g02630 570 ProSiteProfiles AP2/ERF domain profile. 215 298 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02630 Spst-Chr3 74956608 74965920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02630 63 485 AP2-EREBP Transcription Factor Family AT5G10510 42.245 2.97e-84 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02630 K09285 - qsu:112018242 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02630 3 74956608 74965920 Spst3g02630 3 74956608 74965920 PCT