Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02620 ATGAAACAAAAATCAGACTCAGACAACAACGCAACTTCGGACGGATCCGGAGACTCCGACACCCTCTCCCTGCTTCGCCCTTCTCTTTCACTTCTCAAGCGTCGTAGTTTCACCGCCTGTCGCGACTTCACTCTCAAGATCACCAGATCCGACGCCAACACCTCTCTCCAGATCGACCAAATCCTTGCGGTTTCCGACGTTCTCGCCGCCGCAGAGCGCCGCCATGACCCGCTCGACTGGTACTCCATCCTACGCCTCAGTCCGGGCGACGCCGCCGCGGACCGGGACCTCGTACGACAGCAGTTCAAGACCCTAGTGCGTCTCCTGGACCCTAACAAGAACAAGTTTCCCTTTGCAGACGAGGCCCTCATGCGCGTGCGCGAAGCCTGGTGTGTCCTCTCTGACCCCACACTCAAGGCCAGTTTTGACAGCACAATTCAAAATGCGACTTCTTCGTTTTGGACAATGTGCCCTTACTGCTGGTACCTCCACGAATACCTGAAGTGCTACGAGGATTGCACGCTGAGGTGCGCCAATTGCCAGAAGACGTTTCACGGCGCGGCGGTGAAGCCCCCGTCGCCTGAGTCATTGGTGGCGGGGAAAGAGGAGTACTACTGTTACCACATGAGTTTGCCGCTTAGGTATCCTATTGGTGAACGGCGTAGTTTTGGTGAAGAGAATGGGATGCGAAAGAGGTTGAGGGTTAAAACAGTGGCTAATAGGACTAGAATGAAAGGATTTGTTAGTGCCATTGTTGACTCGGATTCTGAGGGTGAGGAGAAAGATGAAGAAAGGTAG 798 0.5426 MKQKSDSDNNATSDGSGDSDTLSLLRPSLSLLKRRSFTACRDFTLKITRSDANTSLQIDQILAVSDVLAAAERRHDPLDWYSILRLSPGDAAADRDLVRQQFKTLVRLLDPNKNKFPFADEALMRVREAWCVLSDPTLKASFDSTIQNATSSFWTMCPYCWYLHEYLKCYEDCTLRCANCQKTFHGAAVKPPSPESLVAGKEEYYCYHMSLPLRYPIGERRSFGEENGMRKRLRVKTVANRTRMKGFVSAIVDSDSEGEEKDEER 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02620 265 Pfam DnaJ domain 79 143 IPR001623 -
Spst3g02620 265 MobiDBLite consensus disorder prediction 1 20 - -
Spst3g02620 265 SMART dnaj_3 78 138 IPR001623 -
Spst3g02620 265 ProSiteProfiles dnaJ domain profile. 79 146 IPR001623 -
Spst3g02620 265 CDD DnaJ 79 135 IPR001623 -
Spst3g02620 265 Gene3D DnaJ domain 78 152 IPR036869 -
Spst3g02620 265 SUPERFAMILY Chaperone J-domain 74 146 IPR036869 -
Spst3g02620 265 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 20 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02620 Spst-Chr3 74826470 74827267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02620 19 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.894 2.74e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02620 - - var:108337473 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02620 3 74826470 74827267 Spst3g02620 3 74826470 74827267 PCT