Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02616 ATGGAGAACATTGACCCTGCAACCTCAAGCCTTCTGTGTATGGAAAGCAATGACATGTGCTTTGATGATTTTGAATGTAATGTTGCAGATGAGTCTCCTCCCTGGGACCACAAAAATCTTAACTTTAACAATCAATGTCTGATTGAGTATAATCTTGGATCGGAACTTGTATTGGATTGTCCAGTACTGAGTGGTGAAATTGTTCTGGATTTGGTTGGGAAGGAGAGTGAACATTTGCCCCGGGCTGATTACCTCAAGAGGCTGCTTGGTGGGGACTTTGACTTGAGTGTTAGGAAGGAGGCTCTTGATTGGATTTGGAAGGCTCATGCACAATATGGTTTTGGACCCTGCAGCATATATCTGTCTATGAACTACTTGGATCGGTTCCTATCGATATATGAATTAAAAAGAGACAGCAGTTGTTGGAGTGCACAACTGTTAGCTGTAGCATGTTTGTCGATTGCTACTAAAATGGATGAGACTAAAGTGCTTTCTTCTGTAGATATCCAGGTTGGAGAACCTAAGTTTGTATTTGAAGCTACAGCCATTAAATCAATGGAGCTACTGATATTAACCACATTGAAATGGAAAATGCAAGCTTTAACTCCGTTTTCCTTCATAGACTACTTCCTCGAGAAAATCACTTGTGACCAACTTCTGGCAAAGTCATTCATTTTGAGATCAGTTGGGCTCATCCTTGACACAATTAGATGTGTCAATTTCTTGGAATTCAAGCCTTCTGAAATTGCCGCAGCAGTGGCAATTTCTGTGTCAAAGAAATTGCAAGCTGAAGAGATTGATGAAGCCTTAACATGTTTTGTCATTGTAGAAAAGGAAAGAATTTTGAAGTGTCTTGAATTGATTAGAGATTTGCCCTTGATTCAATCTTCCACTGATTTGGACAACAACTTTGCACTGTTGGTACCCCAAAGCCCTATCGGGGTACTGGATGCTGCATGCTTGATTTGTATAAGTGATGAATTAACATTTGGATTATCTACGGATTCTTCCTTTAATATTCCAAATTCTAAGAGGATGAAATCTTCTGACCCTCTTGATGGGACTTTCAAGTGA 1074 0.3985 MENIDPATSSLLCMESNDMCFDDFECNVADESPPWDHKNLNFNNQCLIEYNLGSELVLDCPVLSGEIVLDLVGKESEHLPRADYLKRLLGGDFDLSVRKEALDWIWKAHAQYGFGPCSIYLSMNYLDRFLSIYELKRDSSCWSAQLLAVACLSIATKMDETKVLSSVDIQVGEPKFVFEATAIKSMELLILTTLKWKMQALTPFSFIDYFLEKITCDQLLAKSFILRSVGLILDTIRCVNFLEFKPSEIAAAVAISVSKKLQAEEIDEALTCFVIVEKERILKCLELIRDLPLIQSSTDLDNNFALLVPQSPIGVLDAACLICISDELTFGLSTDSSFNIPNSKRMKSSDPLDGTFK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02616 357 SMART Cyclin_C_2 201 324 IPR004367 -
Spst3g02616 357 Gene3D - 71 287 - -
Spst3g02616 357 FunFam D6-type cyclin 195 286 - -
Spst3g02616 357 Pfam Cyclin, N-terminal domain 72 198 IPR006671 -
Spst3g02616 357 CDD CYCLIN_AtCycD-like_rpt2 202 288 - -
Spst3g02616 357 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Spst3g02616 357 Gene3D - 81 199 - -
Spst3g02616 357 SUPERFAMILY Cyclin-like 59 198 IPR036915 -
Spst3g02616 357 SUPERFAMILY Cyclin-like 183 293 IPR036915 -
Spst3g02616 357 Pfam Cyclin, C-terminal domain 202 292 IPR004367 -
Spst3g02616 357 PANTHER CYCLINS 70 288 IPR039361 -
Spst3g02616 357 CDD CYCLIN_AtCycD-like_rpt1 97 196 - -
Spst3g02616 357 SMART cyclin_7 103 192 IPR013763 -
Spst3g02616 357 FunFam D6-type cyclin 81 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02616 Spst-Chr3 74802638 74804715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02616 68 329 Core Cell Cycle Gene Families AT2G22490 52.399 9.17e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02616 K18810 - gmx:100800570 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02616 3 74802638 74804715 Spst3g02616 3 74802638 74804715 PCT