Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02614 ATGGATTTTGAGGACCATGACGAAGCTCAGCTGGGGATGACCGGACCCACCTATGATGACTCGCCGTTCAACCCCTGCCGAGTCAAAATGCCCACTCACACCGCCGAAGAAGACCCCGTGCCGCCGGCGGTCACTCCATCTCCTACCAACACCCGAAACAGTGCCAGGGGAAAGTACAAAGAGTGCCTCAAGAACCACGCCGTCGGAATCGGCGGTCACGCGCTCGACGGCTGCGGCGAGTTCATGGCGGCGGGCGCGGAGGGAACCCTGGACGCCCTTAAATGCGCCGCCTGTAACTGCCACCGCAACTTCCACCGGAAGGACCCCGCCGATAGCCCCTTCCTAATGCCCTTCCAACAGCGCCGCCACCAGCCGCCGCAGTTCGCGGCGGCCTACTTCCGGGCGCCGGCGGGCTACCTGCAGGTGGCGGGTCAGCAGCGTGGAGGCCTAGCCACGCTGGCACTCCCGTCCACGTCAGGTGCGGGCGGTGGGCCCCAGAGCCCGAGGGAGGACCAGGAAGATGTGTCGGACCCAAGTGGTGGTGGTAGCGGGTCCAACAAGAAGAGGTTCAGAACCAAGTTCACTCTGGAGCAGAAAGACAAGATGCTCGCTTTCGCTGAAAAATTGGGTTGGAGGATTCAGAAGCACGACGAGAGTGTCGTGCAGGAGTTCTGTTCCCAAACTGGCGTTCAGCGTCATGTCCTTAAGGTCTGGATGCATAACAACAAGCACACCCTTGGAAGAAAAAAAGCATATAAAAAGATAGAAGAAAAGTGCAGAGAAGGTATTATTCTTGATGAGGAGTCAACTCAAAGGTGCAGTTGTCTAAGATTGGGAGGGACCTCATTTAGATTCGTTTGTATTCACAGCTTTTTCCAAAGCGAAATTGAAGATTTGAAAGGAAAAAAAGGGAAAGTTTCCAAGTCCAGCAAGCAAGAAAGCAAGCAACTGATTGACAACAAGTGCACTCAGTGTCCTCTCCTCTGTTTCCTAGGTCAAGTCCAACCAAACTCCCCTGTCTCTCTCACTTTGTTCCTCGTTTCCTCCGACCCATCCTTTACCAATTACCATTGCTTCCTCCGACTTTCAACATCCATCACACTCTCTATCTGGTTTCAGATTCTTCACACCCCCAACACATATTCCTCTCTGATGGGTTCCATCTCGCACGTGATCACCACCAACCCCACTCTCCTCCACCTACCCTCTACACGCTCCACCGCAATCCGCTTCTCCGGCTTCAATCCTCGCCTCCTCCCGCTGCCACCCGCCAGAGGAGTCGCCGGGAAAGTCGGCGTCTTTGCGGAGCTTAGCAGCCCAAGTAGCACCACTTCCGCCATCGATTTCAGCGACCCCGATTGGAAAACAAAGTTCCAGCAAGATTGGGAGGCTCGTTTCAGACTGCCCCATCTCACCGACATCTTCCCAGATGCTCCTCCCATTCCTTCCACCTTTTGTCTTAAAATGAGAACTCCGATTGATAGAGACTTTCCTGGTCATTATTCTTCTGATGAGGAGTGGCATGGATATATTAATAACAATGACAGAGTGCTTCTTAAGACAATATACTATTCGTCACCTACATCTGCTGGTGCTGAGTGCATTGATCCTGATTGTACTTGGGTGGAACAATGGGTTCATCGAGCTGGGCCTCGGGAAAAGATATACTATAAACCAGAAGAAGTAAAGGCAGCAATTGTTACTTGTGGAGGGCTCTGCCCTGGTCTTAATGATGTTATTAGACAGATTGTAATCACCCTTGAAATATACGGTGTAAATAACATTGTGGGGATTCCTTTTGGCTATCGAGGATTTTCCGACAGAGAATTGACTGAATTGCGGTTATCAAGAAAAGTAGTGCAGAATATTCATCTTTCTGGCGGAAGCCTGTTGGGAGTTTCGCGAGGAGGACCTGGAGTCAGTGATATCGTGGACAGTCTGCAGGAAAGAGGGATCAACATGCTTTTTGTATTGGGTGGAAATGGTACCCATGCTGGTGCAAATGCAATTCACCACGAGTGCTGCAAAAGAGGGTTGAAGGTATCTGTAATTGGTGTGCCCAAAACTATTGACAATGATATATTATTGATGGATAAAACGTTTGGCTTTGATACTGCTGTTGAAGAAGCACAAAGAGCAATAAATTCTGCATACATTGAGGCACATAGTGCATATCATGGAATTGGGGTTGTGAAATTGATGGGCCGTAGCAGTGGATTCATAGCAATGCAGGCATCCCTGTCTAGTGGACAGGTTGACATATGCTTGATTCCTGAGGTACCTTTCAATTTCCATGGTCCTCATGGAGTATTGGGTCATCTCAAGTTCCTTTTAGAAACGAAGGGATCAGCTGTAGTCTGTGTTGCAGAGGGAGCTGGACAGAATTTACTCCAAAAGACAAATGCTAGGGATGCATCAGGAAATGTTGTATTTGGAGATATTGGAGTATATATTCAACAAGAGACAAAAAAATATTTTAAGGAGATTGGTGTTCATGCTGATGTAAAATATATTGATCCAACATACATGATCCGTGCAATTCGAGCTAATGCATCAGATGGAATTCTATGCACTGTACTTGGACAAAATGCTGTTCATGGTGCGTTTGCAGGATATAGTGGCATTACAGTTGGCTTATGTAACACCCACTATGCTTACTTTCCCATCCCCGAAGTGATATCTCATCCTAGGTTGGTGGACCCCAATAGTCGAATGTGGCATCGTTGCTTAACTTCAACAGGTCAACCTGACTTCATCTAA 2760 0.488 MDFEDHDEAQLGMTGPTYDDSPFNPCRVKMPTHTAEEDPVPPAVTPSPTNTRNSARGKYKECLKNHAVGIGGHALDGCGEFMAAGAEGTLDALKCAACNCHRNFHRKDPADSPFLMPFQQRRHQPPQFAAAYFRAPAGYLQVAGQQRGGLATLALPSTSGAGGGPQSPREDQEDVSDPSGGGSGSNKKRFRTKFTLEQKDKMLAFAEKLGWRIQKHDESVVQEFCSQTGVQRHVLKVWMHNNKHTLGRKKAYKKIEEKCREGIILDEESTQRCSCLRLGGTSFRFVCIHSFFQSEIEDLKGKKGKVSKSSKQESKQLIDNKCTQCPLLCFLGQVQPNSPVSLTLFLVSSDPSFTNYHCFLRLSTSITLSIWFQILHTPNTYSSLMGSISHVITTNPTLLHLPSTRSTAIRFSGFNPRLLPLPPARGVAGKVGVFAELSSPSSTTSAIDFSDPDWKTKFQQDWEARFRLPHLTDIFPDAPPIPSTFCLKMRTPIDRDFPGHYSSDEEWHGYINNNDRVLLKTIYYSSPTSAGAECIDPDCTWVEQWVHRAGPREKIYYKPEEVKAAIVTCGGLCPGLNDVIRQIVITLEIYGVNNIVGIPFGYRGFSDRELTELRLSRKVVQNIHLSGGSLLGVSRGGPGVSDIVDSLQERGINMLFVLGGNGTHAGANAIHHECCKRGLKVSVIGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGVVKLMGRSSGFIAMQASLSSGQVDICLIPEVPFNFHGPHGVLGHLKFLLETKGSAVVCVAEGAGQNLLQKTNARDASGNVVFGDIGVYIQQETKKYFKEIGVHADVKYIDPTYMIRAIRANASDGILCTVLGQNAVHGAFAGYSGITVGLCNTHYAYFPIPEVISHPRLVDPNSRMWHRCLTSTGQPDFI 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02614 919 MobiDBLite consensus disorder prediction 153 191 - -
Spst3g02614 919 FunFam Zinc-finger homeodomain protein 2 175 248 - -
Spst3g02614 919 Gene3D - 558 749 - -
Spst3g02614 919 NCBIfam homeobox domain, ZF-HD class 187 243 IPR006455 -
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 684 701 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 723 739 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 651 667 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 566 585 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 592 605 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 780 792 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 PRINTS ATP-dependent phosphofructokinase family signature 702 720 IPR022953 GO:0003872|GO:0006002|GO:0006096
Spst3g02614 919 Pfam ZF-HD protein dimerisation region 58 108 IPR006456 -
Spst3g02614 919 SUPERFAMILY Homeodomain-like 178 248 IPR009057 -
Spst3g02614 919 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
Spst3g02614 919 Gene3D - 172 247 - -
Spst3g02614 919 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 58 108 IPR006456 -
Spst3g02614 919 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 468 919 IPR012004 GO:0003872|GO:0005524|GO:0006096
Spst3g02614 919 MobiDBLite consensus disorder prediction 1 55 - -
Spst3g02614 919 SUPERFAMILY Phosphofructokinase 539 918 IPR035966 GO:0003872|GO:0006096
Spst3g02614 919 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 457 918 - -
Spst3g02614 919 Pfam Phosphofructokinase 564 866 IPR000023 GO:0003872|GO:0006096
Spst3g02614 919 FunFam ATP-dependent 6-phosphofructokinase 558 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02614 Spst-Chr3 74778479 74792683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02614 55 256 ZF-HD Transcription Factor Family AT4G24660 52.174 5.34e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Spst3g02614 PFK 1.3e-61 CL0240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02614 K00850 - gmx:100793883 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01349 2 12160811 12171024 Spst3g02614 3 74778479 74792683 PCT