Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02607 ATGGAAGAAGCATTGCGCCGTCTCAACGGAGTTGCTCCCACTCAAGAACCCGACGTAGTTTCAGACCCCCACCCGAAGAAGTGCGCCGCCAAGCGCACCCTGCGTGACACCTCCAACTCCGGCACCGCCATGCGCTACCGTGGGGTGCGGCGCCGCCCATGGGGCCGTTATGCTGCTGAGATCCGTGACCCACAGTCCAAGGAACGTCGCTGGCTCGGCACCTTCGACACAGCGGAGGAGGCTGCCTGTGCCTATGACTGTGCAGCCCGTGCCATGCGCGGTGTCAAGGCCCGCACCAACTTTGTCTATCCTGATGCAGCCGATCCTCACCTATTCCATCCCTTCAACCTACCCAAACACTGCCACATCAGTAGGTTCCCCCATAACACAAACTTCGGGAGTGACTTCACTGCAAGTTCCCAAAATAACGCTTCTTCTTCCTCTCTCAACATGCTTCTCTTTCGTGACTTCCTCAACTCTTCTAATCCATGTCTGGTTTCTTCATCTTCTTCTCAGCAGTTTCATAATAATAAATCTAGTGGGAGTTATGTCAACTCTTCGTCTTCATCTCTATCTTCTTCTGCTGCCACTAACTGTCTCCAAGGTTTCAGTGTTGGCAACACAAATAACTATAACAGCACTGTTAGTGCTAATCATGGAGCTGAAGTAGCTGAAGCTACTGAAGAAGACTCGGACTTTTTCCTGCGGGAGTCTTCGGATTCTGGGCTGTTGGAAGAGATAGTTTATAAGTTCTTGCCGAAATCAAAGCCTAAAATGGAGACTTCGACTTTGCCTCTTCCTGATTCCGTTCCTCAACCTATACTTGATCATATGGTTGTTTCTGCTAGCAAGGGTTATGCTGATTCCAGGTTGAGGGTTCCCAAGGTTGAAGGTTTTGGTGTCTGTTATGATTCTCCCATCCAGCAATTTGAAGCTCTAAGTGGTTTTAACGCCATGCAGTCTATGACGTCTATGGAGAGAGACAACCAGTTTATGATGAACCATATTGCAGGGTGCTCCAACTTGGAGGATTATCTTCAGTACCCAGAACTTTTCAATTCCTTTGCAGCCAGGATGCAAAATGCTTAA 1089 0.4913 MEEALRRLNGVAPTQEPDVVSDPHPKKCAAKRTLRDTSNSGTAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDAADPHLFHPFNLPKHCHISRFPHNTNFGSDFTASSQNNASSSSLNMLLFRDFLNSSNPCLVSSSSSQQFHNNKSSGSYVNSSSSSLSSSAATNCLQGFSVGNTNNYNSTVSANHGAEVAEATEEDSDFFLRESSDSGLLEEIVYKFLPKSKPKMETSTLPLPDSVPQPILDHMVVSASKGYADSRLRVPKVEGFGVCYDSPIQQFEALSGFNAMQSMTSMERDNQFMMNHIAGCSNLEDYLQYPELFNSFAARMQNA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02607 362 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Spst3g02607 362 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Spst3g02607 362 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Spst3g02607 362 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Spst3g02607 362 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Spst3g02607 362 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Spst3g02607 362 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Spst3g02607 362 MobiDBLite consensus disorder prediction 1 43 - -
Spst3g02607 362 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Spst3g02607 362 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Spst3g02607 362 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02607 Spst-Chr3 74679050 74680138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02607 1 320 AP2-EREBP Transcription Factor Family AT1G24590 37.278 2.88e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst3g02607 AP2 6.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02607 - - aprc:113860142 421.394