Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02584 ATGGAAAGAATGGTCCCTGTTGTCTATTTCCAATGCCTTGTTTTCCTTCTCATGAAGGCTTTATTGCTATCAAAAACAGTGATGGCAGAACCAAGGGCCAAGACTGTCAATATAACATGTAACCACAAGCTAGAGCACAACTCCACTATCTTTGTTCCAAATTTTGTTGCAACCATGGAGAAGATTAGTGAACAGATGCGCAACACTGGTTATGGCAAAGCAGTTGTAGGGACAGGAGGACCTGACACTAACTACGGGTTAGCTCAGTGCTATGGTGATCTCTCATTACTTGACTGTGTTTTATGTTATGCCGAGGCACGCACAGTTCTTCCCCAATGCTTCCCTTACAGCGGTGGTCGCATATACCTTGATGGCTGCTTCATGAGGGCTGAAAACTACAGCTTCTATGATGAGTACACAGGACCAGGAGACAAGGCTGTTTGTGGAAACACAACAAAGAAGAACGCAAGTTTTCAAGCAGCAGCAAAGAAGGCCGTTATGACTTCTGTTCAAACTGCACCAAACAATAAAGGGTATGCTAGGGCTGAGGTTGCAGTAGCAGGAACAGCAAATGACTCAGTTTATGTTCTGGCTAACTGTTGGAGAAGCTTGGACGCAAAGTCTTGTAGAGCTTGTCTTGAAAATGCATCTTCTTCCATATTAGGGTGCCTGCCCTGGTCAGGAGGGCGAGCACTGAACACTGGATGCTTCATGAGGTACTCAGACACAGATTTTCTTAACAAGGAAGAGGAAAATGGTTCAGGAGATAATGTATTAGTGATAGTGATTGCAGTTGTCAGTTCAGCGATTGTTTTGGTAATTGGAATAGCTATTGTGGTTTATATCCGAAAACTCAGATACGTTCAAATGAAACGAAGAGGTTCAAGTGATGCAGAAAAGTTAGCCAAAAGCCTTCACCACAATAGCTTGAACTTCAAATACTCTACACTGGAGAAGGCTACTAATTCCTTTGATGAAGCTAACAAGCTTGGACGAGGAGGATTTGGAACGGTTTATAAAGGAGTTCTGCCTGATGGAAGAGAGATTGCTATCAAGAGATTATATTTCAACAACAGACACAGAGCAGCAGATTTCTACAATGAAGTCAACATGATTAGTAGTGTGGAACACAAAAATCTGGTCAGACTCTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTGCTTATATATGAATTGCTACCTAACAGAAGTCTCGATCGCTTCATATTTGATAAAAACAAGGGTAGAGAACTAAGTTGGGACAAGAGATATGACATTATCATCGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAACTCTGACATTAGGATAATCCACAGAGATATAAAAGCCAGCAACATCTTATTGGATGCAAAGCTTCGCGCTAAAATTGCCGATTTTGGTTTGGCCAGATCCTTTCAAGATGATAAGAGCCACATTAGTACAGCTATTGCTGGAACTTTAGGTTATATGGCTCCAGAGTACCTAGCACATGGTCAGTTAACAGAGAAAGCAGACGTATATAGCTTTGGAGTGTTACTGTTAGAAATAATTACTGGGAGACAGAATAACAGGAGCAAAGCATCAGAATATTCCGACAGCCTAGTGGCAATGACATGGAAGCATTTTCAGTCAGGGACAGCGGAACAATTAATTGATCCATGTCTATTGTTGGATGACAACCATAGAAGCAATGTTAAGAATGATATTTTAAGAGTGGTGCAGATAGGACTTCTATGCACCCAAGAAATCCCTTCCTTGCGACCATCTATGTCAAAGGCTCTAAAGATGCTAACAAAGAAGGAGGAGCACATGGAAGCACCCTCCAATCCACCCTTCATAGATGAAAGTACCATGGCACTTCATGATCAAAATGATGACCCATTTTACCCTCTCTATGTAGCAGACTCATTGGCTACTATGTCCCATAGCTCATTTTATCCAAGGTAA 1953 0.4199 MERMVPVVYFQCLVFLLMKALLLSKTVMAEPRAKTVNITCNHKLEHNSTIFVPNFVATMEKISEQMRNTGYGKAVVGTGGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYSGGRIYLDGCFMRAENYSFYDEYTGPGDKAVCGNTTKKNASFQAAAKKAVMTSVQTAPNNKGYARAEVAVAGTANDSVYVLANCWRSLDAKSCRACLENASSSILGCLPWSGGRALNTGCFMRYSDTDFLNKEEENGSGDNVLVIVIAVVSSAIVLVIGIAIVVYIRKLRYVQMKRRGSSDAEKLAKSLHHNSLNFKYSTLEKATNSFDEANKLGRGGFGTVYKGVLPDGREIAIKRLYFNNRHRAADFYNEVNMISSVEHKNLVRLLGCSCSGPESLLIYELLPNRSLDRFIFDKNKGRELSWDKRYDIIIGTAEGLVYLHENSDIRIIHRDIKASNILLDAKLRAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIITGRQNNRSKASEYSDSLVAMTWKHFQSGTAEQLIDPCLLLDDNHRSNVKNDILRVVQIGLLCTQEIPSLRPSMSKALKMLTKKEEHMEAPSNPPFIDESTMALHDQNDDPFYPLYVADSLATMSHSSFYPR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02584 650 Gene3D - 32 135 IPR038408 -
Spst3g02584 650 Gene3D - 145 245 IPR038408 -
Spst3g02584 650 ProSiteProfiles Protein kinase domain profile. 324 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02584 650 Pfam Salt stress response/antifungal 48 133 IPR002902 -
Spst3g02584 650 Pfam Salt stress response/antifungal 148 242 IPR002902 -
Spst3g02584 650 Gene3D Phosphorylase Kinase; domain 1 285 399 - -
Spst3g02584 650 FunFam Cysteine-rich receptor-like protein kinase 3 144 245 - -
Spst3g02584 650 Gene3D Transferase(Phosphotransferase) domain 1 400 616 - -
Spst3g02584 650 FunFam Cysteine-rich receptor-like protein kinase 2 33 135 - -
Spst3g02584 650 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Spst3g02584 650 CDD STKc_IRAK 330 601 - -
Spst3g02584 650 FunFam Cysteine-rich receptor-like protein kinase 2 400 607 - -
Spst3g02584 650 FunFam Putative DUF26-domain receptor-like protein kinase family protein 286 399 - -
Spst3g02584 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 624 - -
Spst3g02584 650 Pfam Protein kinase domain 325 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02584 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Spst3g02584 650 ProSiteProfiles Gnk2-homologous domain profile. 33 135 IPR002902 -
Spst3g02584 650 SMART serkin_6 324 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02584 650 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Spst3g02584 650 SUPERFAMILY Protein kinase-like (PK-like) 307 629 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02584 Spst-Chr3 74211880 74214644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02584 8 650 Receptor kinase-like Gene Family AT1G70520 66.563 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g02584 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02584 - - gmx:100818343 1160.21