Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02545 ATGTTTAATAGCATGTTACATTTCTCTTGTTCTAATGTAATGAACTTTCAAGGGAAAAGCTCTTTGCTATTGCTTCTCCTGCTGTTCATCACCCTTTATCTTGGATCTTCTCAAACTTCTGTTTATAATTGTGTCCTTGATATTCAATCTTCTTCATCCTTGGTTAGTTCAAATTGTGAATTGTACAATTGGGGAGGGTTTACCAATGGCTGTTGTGGACCATATTTTGGTGATTACCTTTATTCCTTGGGGCTGAGGGCAAACCAAACTGGAGAAGTATTCTTGAGTCCCTCAGAGCAAAAAAACTGCATAGCATCAATGGAAGCTTTTGACAAAAAGTTTAATTGTTATGGAATAGAGAAGCTAACACGTGGAACTAATGGTTGCTCTGATTACACCATCGCAGATGTTATTAATCAGTTTGGATACAACCTTGGGAGATTGGAGGAAGATTGCATGCCTTTAAGCACAAATGGTAGACCAAATGAAACTTGCACCAATTGTTTGAAAGCATGGGAGAATATCAGTGCAAAACCAGACAATACGAGGGGCTCAGAGTCAGCAAATGTCAGTTCTTATCTTTGTAGATTTGCGGTGCTTGTCTCACTAACAAGCACAAGAATTTATGATAGGGAATCAATTCTGAGAGTTTATAAATGCCTTGGGGAACAGGCCCTTTCTGCAGCCAATCAAGAAATCAAGGCTAGGGGGAATGCTAATATCAACTCAGGTCCCTGGATTGCCTTTGGCATAGCAGGAGTTGTTATAGTATTGGTGCTTCTTGCCGCACTAGCATTATTTATCACAAGAATTTTAAGTGTTCCAACCGTAAAACATGAGTCTGATTCACCTTCACTGAAGATAACTTTGAAGGATGTTTATGTAGCAACAAACAATCTCAATGCTTCAAATTTCATAGGCCAAGGCATAGCCGGAAAAGTGTACAAAGGTGTACTCTCCAACAAAAATTCTGTTGCTGTGAAGCATATCACCAAAGAAGGTTACATGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTTAGACATCACAATCTAGTGGCTTTGCTGGGACACTGTGAAAGTGAAGCTGAATGCTTCCTAGTGTATGAGCTATGCCACAATGGAAACCTCTCAGAATGGCTATTTGGCAATGACAAAGTTCTTTCATGGATTCAAAGACTAGAGATTTCCATTAATAGTGCAAGAGGTCTTGAGTTTCTCCACACCTACCCAAATGGTTGCATCGTTCACCGTGATATAAAGCCATCAAACATTCTTATTGACGTTAACTTCCAAGCAAAGCTTTCAGACTTTGGGTTGTCCAGGGTTATGGACTTAGGCCAATCCTATGTGAGCTCTGAAGTAAGAGGAACATTTGGTTATATTGATCCTGAATATAGGACAAATCACCATGTAAAAGCCTCAGGAGATGTCTACAGCTTTGGAATAGTGTTATTGCAACTTCTATCAGGACAAAGGATCCTTAACATTGATTTCCAAAGACCAATGTCTCTGGGTAAAATGGCTAAAGATGCTGTTAGAGGCAGTGATATTTCAGACTTTGCAGATCCTAAACTCAAAGGGGAGTACTCAGTTGAAGCATTTAACATGGTACTAAAGCTAGCTTTGTCTTGCATAGGGGACAAGCGACGAAGACCCTCTATAGAGCAAGTGTTATATAGCCTAGAAAAGGCACTTGATATTTCATTATAA 1719 0.3956 MFNSMLHFSCSNVMNFQGKSSLLLLLLLFITLYLGSSQTSVYNCVLDIQSSSSLVSSNCELYNWGGFTNGCCGPYFGDYLYSLGLRANQTGEVFLSPSEQKNCIASMEAFDKKFNCYGIEKLTRGTNGCSDYTIADVINQFGYNLGRLEEDCMPLSTNGRPNETCTNCLKAWENISAKPDNTRGSESANVSSYLCRFAVLVSLTSTRIYDRESILRVYKCLGEQALSAANQEIKARGNANINSGPWIAFGIAGVVIVLVLLAALALFITRILSVPTVKHESDSPSLKITLKDVYVATNNLNASNFIGQGIAGKVYKGVLSNKNSVAVKHITKEGYMETFVREVRSLSHVRHHNLVALLGHCESEAECFLVYELCHNGNLSEWLFGNDKVLSWIQRLEISINSARGLEFLHTYPNGCIVHRDIKPSNILIDVNFQAKLSDFGLSRVMDLGQSYVSSEVRGTFGYIDPEYRTNHHVKASGDVYSFGIVLLQLLSGQRILNIDFQRPMSLGKMAKDAVRGSDISDFADPKLKGEYSVEAFNMVLKLALSCIGDKRRRPSIEQVLYSLEKALDISL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02545 572 Pfam Protein kinase domain 304 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02545 572 SUPERFAMILY Protein kinase-like (PK-like) 283 564 IPR011009 -
Spst3g02545 572 Gene3D Phosphorylase Kinase; domain 1 270 373 - -
Spst3g02545 572 Gene3D Transferase(Phosphotransferase) domain 1 374 571 - -
Spst3g02545 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Spst3g02545 572 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 210 565 - -
Spst3g02545 572 FunFam probable receptor-like protein kinase At5g59700 374 572 - -
Spst3g02545 572 ProSiteProfiles Protein kinase domain profile. 300 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02545 572 SMART serkin_6 300 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02545 572 Pfam SPARK 43 183 IPR043891 -
Spst3g02545 572 FunFam Serine/threonine kinase protein 265 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02545 Spst-Chr3 73580960 73583727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02545 287 570 Receptor kinase-like Gene Family AT1G49100 40.550 1.85e-59 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Spst3g02545 Pkinase 7.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02545 - - gsj:114395768 926.776