Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02522 ATGCCATTTGGTTTAGTCTCAGCATGGAACAAGCGTCGAAGAAGCATGTCTCAAGATCATTCAGACCCTTGGATTTATAAACCTGCAGAGTTTTGGCAGCTTGAAGATCAAACACCACAACCTACAAAAAGGAGGCATAGATCATCTGTTTTCACATTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGGTAATCTGCTTGGAAAAGGAGGATTTGGCAGGGTCTACAAGGGTAATTTGAAGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAACTGCCGGCAATTAAAGCAGCAGAGGGGGAGCGCGAATTCCGTGTAGAGGTTGACATATTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGATACTGTGCTGATGGGAAGCATAGGTTCCTAGTTTACGAATATATGCATAATGGGAACCTGCAAGATTATTTGAATGGGATGGGAGAAAGAAAAATGGATTGGCCTCTGAGACTCAAAGTGGCACTTGGAGCTGCAAAAGGGCTTGCTTATCTCCATTCAAGTTCTTGTCTAGGAATTCCTATTGTTCACAGAGATTTCAAATCCACCAATGTTCTTTTAGATGCCAATTTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAACTAATGCCAGAAGGACAGGAGACACATGTGACTGCCAGAGTACTCGGTACCTTTGGTTATTTTGACCCTGAGTATACATCGACCGGAAAACTTACACTACAGAGTGATGTCTATGCTTTTGGAGTTGTTCTTCTGGAGCTTCTCACTGGACGTCCAGCTGTAGATCTAAACCAGGGCCCAAATGATCAAAATCTTGTACTACAGGTGAGGCACTTACTGAATGAGAGGAAGAAGCTTCGAAAGGTGATAGATGCAGAGATGGCTCGAAATTCTTACACAATTGAGTCTGTATTCATGTTTGCCAATCTGGCTTCACGATGTGTCCGTTCTCAGAGTAACGAGAGACCTTCAATGGTAGATTGTCTCAAAGAAATCCAAATGATTATACATATCAATTCAAAGGGCTTGGGATTGGTTATGCATAGCTTGAGAATGGTCTAA 1086 0.4217 MPFGLVSAWNKRRRSMSQDHSDPWIYKPAEFWQLEDQTPQPTKRRHRSSVFTFKEMEEATCSFSDGNLLGKGGFGRVYKGNLKSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDYLNGMGERKMDWPLRLKVALGAAKGLAYLHSSSCLGIPIVHRDFKSTNVLLDANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRPAVDLNQGPNDQNLVLQVRHLLNERKKLRKVIDAEMARNSYTIESVFMFANLASRCVRSQSNERPSMVDCLKEIQMIIHINSKGLGLVMHSLRMV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02522 361 SUPERFAMILY Protein kinase-like (PK-like) 39 345 IPR011009 -
Spst3g02522 361 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Spst3g02522 361 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Spst3g02522 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Spst3g02522 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Spst3g02522 361 Gene3D Transferase(Phosphotransferase) domain 1 142 351 - -
Spst3g02522 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02522 361 PIRSF ILK 28 351 - -
Spst3g02522 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02522 361 PANTHER OS01G0750732 PROTEIN 39 347 - -
Spst3g02522 361 FunFam receptor-like serine/threonine-protein kinase NCRK 142 352 - -
Spst3g02522 361 CDD STKc_IRAK 69 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02522 Spst-Chr3 73202364 73204851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02522 50 344 Receptor kinase-like Gene Family AT3G58690 45.333 6.71e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Spst3g02522 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02522 - - gmx:100820613 677.167