Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02499 ATGCCTTTGAATATGATGCTTCAATCGTGGCCTTTAATGACCCTTCTATTTGTTTTACTTCTGCACAGTTTCTCAATACCAACCTGTCATGGCCAAACCAGAAGTTCTCCTCCTCAGAACATTGAAACTTTCTATCCAAATGAAACTTCAGCAGTACAACAACCTGAGACATCACCACAGACACAACAACCACCAACACTACCAACTGGTAACACAGCACCTAGCCGCGGTTCTTCCAGTGGTAAGATGGCCAAGGCGGTGGCTGCAACTGCAGCCAGCACCATAGTTGTTTGTTGTTTAGTTTTCTTTTTGTTGCGAAGGTGCTTGAGGGCCAGAAAGAGAAAGGGAGAGGTGATAAGTAACCCTGTTTCTGGTGGAGATACCCGTGTTGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGAAATGTGAAGGGGTTGATTGTGGACGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGAAAGAACAGTAACAAGGATCTACATAAAGAGGTTTTGAGTAGTCCCAGAAACAAAGAAAAAGAAGATGATCATGATGAAAATCAAGTGAAGAAGTCCAAGTCCATCCAAGAAGTTCCTCTGCTTAGAGGGAAATCGTCAACTTCCCACTTAAATGTATCACCAGAAGAGGATGTACCATACAGATTTTCACCAATTTCTTCTCCTCCTCCTGCTTCTGCTTCTGTTTCTGCTCCTACTCCTTCTAGTCTTCCATCATCAGTTGGGGTTATTATCAGGGGTGCTCAGAAACCAGACTCTCCAACTCAACCATCAACTCCACCCCCTCCAGTTTCACCGTCGACACCTTCATCCTCTAGTTCTATTTCAGCAGTGCCGAAGGCGGCTAATCTTGCGCCGGCACCTCCCCCTCCCCCAATCCCAGCGAGAAGAACTCCAGCACCTCCTCCTCCTCCAGCCTCATCAAAACCACCACCTGCTCCAATTGAAATGCCAGCTATTAAGCATAGAAACTCTTCAGGGAAAGGCATCCCAGAAACCAGCAATGACCAAGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGCTCTTTCAGGGTTGATCATGATCTCATGGAAGCTCTCTTCGGTTATGTCGCGACCAACCGGAGATCTCCCAAAGGAAAAAGTCACTCAGCCATTCCAAGCAAGGATTCCTCAGCTTCGTCAGCAAAAATTTTCCTTCTTGACCCGAGAAAATCACAGAACATTGCTATTGTTCTCAAATCTCTTGCAGTCTCACAAGGTGAAATTGTTGACGCACTCACTGATGGTAAGGGCCTAAAACCAGATACTCTTGAAAAGCTTGCTAGAATTTCCCCAACAGAAGAAGAGCAATCTCTTATCCTTGAATACAAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATATTTCCTTTATAATATCATCAAAGCTGTTCCCTCAGCTTTTAAGCGCTTGAATGCCATGCTATTCAGGTTGAATTATGACTCTGAGATTCAAGAAACCAAGGAATATCTGCAGACCATTGAACTGGGGTGTAAGGAGCTTAAAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTCAAGGCAGGAAACCGAATGAATGCAGGAACTGCAAGGGGCAATGCACAAGCCTTCAACTTGTCTTCTCTAAGGAAACTCTCTGATGTTAAGAGCACCGATGGAAAAACCACATTACTTCACTTTGTGGTTGAAGAGGTAATCCGTTCTGAGGGAAAACGGGTTGCTCTTAACCGCAATGGCAGTAGCAGCAGTAACAGTAGTAGGAGCAGCAGCAGTAGCAATGGAAACTACGAGAACAATGCTGCTTCAAGTGAACTGATAGAAAGGGAATATATGACATTAGGATTACCAATCGTAGGAGGGATCAGTTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTTTAACAATTTAGTTGGTTCAATCTCTGCCCTCTCAACCCGGTTAGTCAAAGTTCAAGAACTGGTTTCCTTGTGTGAAAATAGTGAAGGAGGACATTTTTTAAAGGTAATGGATCATTTTCTTGGAAATGCCGAGGAAGAGCTGAAATTATTGAGGGAGAAGCAAACAAGTGTGTTGCAGCTTATCAAGAAAACAACACAGTATTATCAAGGAGGAGCTTCAAAAGAAACTGCAGAAGACAATCTTCAATTGTTTGTCATAGTGAAGGATTTCCTGGGAATGGTTGATCAAGCTTGCATTCAGATTGCACGTGACATGCAGAAGAGGAAGTTTCCTCCAAAGTCAATTTTTGTATAG 2352 0.4358 MPLNMMLQSWPLMTLLFVLLLHSFSIPTCHGQTRSSPPQNIETFYPNETSAVQQPETSPQTQQPPTLPTGNTAPSRGSSSGKMAKAVAATAASTIVVCCLVFFLLRRCLRARKRKGEVISNPVSGGDTRVVPQGNVFERIDGNVKGLIVDEDGLDVIYWRKLEGKNSNKDLHKEVLSSPRNKEKEDDHDENQVKKSKSIQEVPLLRGKSSTSHLNVSPEEDVPYRFSPISSPPPASASVSAPTPSSLPSSVGVIIRGAQKPDSPTQPSTPPPPVSPSTPSSSSSISAVPKAANLAPAPPPPPIPARRTPAPPPPPASSKPPPAPIEMPAIKHRNSSGKGIPETSNDQVKLKPLHWDKVNTNNADHSMVWDKVDRGSFRVDHDLMEALFGYVATNRRSPKGKSHSAIPSKDSSASSAKIFLLDPRKSQNIAIVLKSLAVSQGEIVDALTDGKGLKPDTLEKLARISPTEEEQSLILEYKGDPARLAAAEYFLYNIIKAVPSAFKRLNAMLFRLNYDSEIQETKEYLQTIELGCKELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLSSLRKLSDVKSTDGKTTLLHFVVEEVIRSEGKRVALNRNGSSSSNSSRSSSSSNGNYENNAASSELIEREYMTLGLPIVGGISSELSNVKKAAQIDFNNLVGSISALSTRLVKVQELVSLCENSEGGHFLKVMDHFLGNAEEELKLLREKQTSVLQLIKKTTQYYQGGASKETAEDNLQLFVIVKDFLGMVDQACIQIARDMQKRKFPPKSIFV 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02499 783 MobiDBLite consensus disorder prediction 49 80 - -
Spst3g02499 783 SUPERFAMILY Formin homology 2 domain (FH2 domain) 353 775 - -
Spst3g02499 783 MobiDBLite consensus disorder prediction 170 196 - -
Spst3g02499 783 MobiDBLite consensus disorder prediction 604 628 - -
Spst3g02499 783 MobiDBLite consensus disorder prediction 170 352 - -
Spst3g02499 783 PANTHER FORMIN-RELATED 17 771 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst3g02499 783 MobiDBLite consensus disorder prediction 293 327 - -
Spst3g02499 783 Gene3D Formin, FH2 domain 360 777 IPR042201 -
Spst3g02499 783 MobiDBLite consensus disorder prediction 49 79 - -
Spst3g02499 783 Pfam Formin Homology 2 Domain 344 760 IPR015425 -
Spst3g02499 783 ProSiteProfiles Formin homology-2 (FH2) domain profile. 340 783 IPR015425 -
Spst3g02499 783 SMART it6_source 340 775 IPR015425 -
Spst3g02499 783 MobiDBLite consensus disorder prediction 264 278 - -
Spst3g02499 783 MobiDBLite consensus disorder prediction 203 217 - -
Spst3g02499 783 MobiDBLite consensus disorder prediction 603 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02499 Spst-Chr3 72811263 72813707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02499 5 775 FH2 protein (formin) Gene Family AT1G70140 44.713 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02499 - - gmx:100783219 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02499 3 72811263 72813707 Spst3g02499 3 72811263 72813707 ECH
Spst3g02499 3 72811263 72813707 Spst9g02282 9 53528323 53530635 ECH
Spst3g02499 3 72811263 72813707 Spst3g02499 3 72811263 72813707 PCT