Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02481 ATGCCGTCTCACGCGGATCTGGAGCGTCAGATCGAACAGCTGATGGAGTGCAAGCCTCTGTCGGAGTCGGAGGTGAAGACCCTGTGCGATCAAGCGAGGGCGGTTCTGGTGGAGGAGTGGAACGTGCAACCGGTGAAGTGCCCCGTCACCGTCTGCGGCGATATTCACGGCCAGTTCTACGATCTCATTGAGTTGTTTCGGATTGGAGGGAGCGCACCCGATACCAATTATCTCTTCATGGGTGATTATGTAGATCGTGGATACTATTCAGTGGAGACTGTTTCTCTTTTGGTGGCTTTGAAAGTCCGTTACAGAGATAGAATCACAATTCTCAGGGGAAATCATGAAAGTCGTCAAATTACTCAAGTGTATGGCTTCTATGATGAATGCTTGAGAAAATATGGAAATGCCAATGTCTGGAAATACTTTACAGACTTGTTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGGTTTTCTGCTTGCATGGAGGTCTCTCGCCTTCTTTGGATACTCTGGATAACATCAGAGCATTGGATCGTATACAAGAGCGTAGCTTTAGGTTTCTATCAAATGGTGTTTTCATGAGCTCTCCTCCCACAGCTGCCACCACCATGGAAGACAGCCTCCAAGCTATTTTCCAGAAACTAGTTGTCTTCCAGGCCCAAATCACCCACTATGAAGAACAACAAAAATCTCACCACACTACCCTCTTACAGTCCATTGATGCTTGTCATGCCACCCTCACCTCTGCCATTAATGGTCACTCAACAGGTTGTCAGTTGTCCCTTTATCCCACAACACCACATTACCTCCTTGAGTCTACTTCCAAAACCATCCCTTTTCCACCGACGATTCAGTGGCAAAGCTCTCCATCTCCCTCCTTTCAGCACCTCCCATGCCCAAAACCAATGTCGCATACATCAACAGCCACAAGACATGCTCCACACATTCACCATCTTGGCATCACACACCCTCAGGTTCCACATGAAGGACCAATGTGTGATCTATTGTGGTCTGACCCTGATGATCGTTGTGGATGGGGAATATCTCCCCGTGGGGCAGGATACACATTTGGACAGGATATTGCTGCTCAGTTTAACCATACCAATGGTCTCTCCCTGATATCTAGAGCTCATCAGCTTGTTATGGAGGGATACAATTGGTGCCAGGACAAGAATGTGGTTACCGTATTTAGTGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTAGAAATAGGAGAGAATATGGATCAGAGTTTTCTTCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACCACACGCAAGACTCCAGATTATTTTTTGATGGCACTGCGACAAATGGTGTCCACCACGCTCTTGACGAGCCTCATGTTTTGCCAACAATTTTATGCATGGACACATGGAATTAAGAGCCTGCTTCCACCACTCGTGGTGGCGTTGGTGTGCTCGGGTCATGATCATGCAAGAGGGAGGTGGGAAACATGTGATGGAATGGGCAGAAGGAAGTGTAGTATTGGAGGAAGAGCTAGCAGGAGAGGGAATGGCCAAAAGAAAAACAAGAATGAGTGGGTGGTAGTGCAGGATGGGGAAAGACCAATAGAAAAATATAACAAAGAAGGAACACATGTGGTGGCCGAATGCAACGAATCTTCTATATCAAAATTTTGCAGGAGTGAAAGAGCACAAGAGATGGAGAGGACAAAAAAGCGACGTTCCTACCTCATGAAACCACCAAAGGAGGACCCACCAACCTATGTAAGTCGACCATTAGACGATGTTGACATCAACGCTGAGAACTATATCAACCATGTTCGTGGAAAGATCAGGGGTAGTGCAAATATTCAACATTGA 1875 0.4661 MPSHADLERQIEQLMECKPLSESEVKTLCDQARAVLVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQERSFRFLSNGVFMSSPPTAATTMEDSLQAIFQKLVVFQAQITHYEEQQKSHHTTLLQSIDACHATLTSAINGHSTGCQLSLYPTTPHYLLESTSKTIPFPPTIQWQSSPSPSFQHLPCPKPMSHTSTATRHAPHIHHLGITHPQVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQSFLQFDPAPRQIEPDTTRKTPDYFLMALRQMVSTTLLTSLMFCQQFYAWTHGIKSLLPPLVVALVCSGHDHARGRWETCDGMGRRKCSIGGRASRRGNGQKKNKNEWVVVQDGERPIEKYNKEGTHVVAECNESSISKFCRSERAQEMERTKKRRSYLMKPPKEDPPTYVSRPLDDVDINAENYINHVRGKIRGSANIQH 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02481 624 CDD MPP_PP2A_PP4_PP6 6 433 - -
Spst3g02481 624 Pfam Calcineurin-like phosphoesterase 48 186 IPR004843 GO:0016787
Spst3g02481 624 SUPERFAMILY Metallo-dependent phosphatases 6 448 IPR029052 -
Spst3g02481 624 Gene3D - 2 264 IPR029052 -
Spst3g02481 624 Gene3D - 288 449 IPR029052 -
Spst3g02481 624 SMART pp2a_7 20 433 IPR006186 GO:0016787
Spst3g02481 624 MobiDBLite consensus disorder prediction 574 597 - -
Spst3g02481 624 PRINTS Serine/threonine phosphatase family signature 373 393 IPR006186 GO:0016787
Spst3g02481 624 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Spst3g02481 624 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Spst3g02481 624 PRINTS Serine/threonine phosphatase family signature 395 411 IPR006186 GO:0016787
Spst3g02481 624 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Spst3g02481 624 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Spst3g02481 624 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 449 IPR047129 GO:0004722
Spst3g02481 624 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02481 Spst-Chr3 72564851 72575843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02481 49 171 Calmodulin-binding Proteins AT5G63870 45.312 1.31e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02481 K04382 - gmx:100783950 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02481 3 72564851 72575843 Spst3g02481 3 72564851 72575843 ECH
Spst3g02481 3 72564851 72575843 Spst2g01507 2 13822992 13826413 PCT