Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02480 ATGTCGCCGGAAAGTGACCTCATATCTGCGACGCCGGGAGCATTCTTGCTGCGGTGGGACGTGTTCCTGAGCTTCAGAGGCGCCGACACGCGCGACGCTATCACGAAAGGTCTGCACGACTGTCTGCAGGCACGTGGGGTTCGCGTGTTTCTGGACGACGTGGGGTTGGAGCGTGGGGAAGAGATAAAGAGGGGGCTGATGGAAGCCATTGATGACTCTGCAGCTTTCATTGTCATCATATCTCAAAACTACGCTTCTTCACATTGGTGTCTTGAGGAACTAACCAAGATTTGCGACACCAGCAGGCTCATCTTGCCCGTTTTTTACCGGGTCGACCCGTCCGAGGTTCGACACCAATCGGGTCCCTTCGGAAAGAGTTTCGAATCGCATGAAAAAAGGTTTGAGGAAAGTGAGGTTTTACATTGGAAGAAAGCTTTGAAGAAAGTTGGTGGACTCGCTGGTTTTGTTTTTAATCACAGTGAGGAAGATGATCTGATTCGGCGTTTGGTGCAAAGGGTGTTGAAGGAGTTGAGTAATACTCCTTTGGGTGTGCCTGAGTTTGCAGTGGGACTTGATGAACGTGTTGAGAAGGTGATGAAGGTGTTACAAGTTCAATCCAACGGTGTCAAGGTTTTGGGATTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTGGCCAAGGCACTTTTCAATGCTCTTGTTAAACGTTTTGAGCACCGTTGCTTCATTTCCAATGTCAGACAAGTTTCATCAAAACAAGATGGTTTGGTTTCCCTTCAAAGCAAAATCATTAAAGACCTTTTTCCTGGAGCAGGGTCTCCCTCCATCAGTGATGTCAATGTTGGCACTTCTGCTATCAAAGGGATAGTTAGTGAGAAACGAGTTTTACTTGTCTTGGATGATGTTGATGACGTGCAGCAGATTGATGCTTTGATTGGTAAGAGGGAATGGTTTTATGATGGAAGCTGTGTGATAATCACAACGAGGGATACACAAATTTTACCTCAGAGTCATGTGAGTGAGTTGTATGAAGTTAGAGAGTTGAATGATTCTCAAGGTCTTGAGTTGTTCAGTTACCATGCACTGAGAAGAAATAAACCACCAGAAAATTTGCTGAGGCTATCAAAGGAGATAGTGTCTCTGACGGGACAAATGCCTTTGGCTCTGGAAGTGTTTGGCTCGTTTTTGTTTGGCAAGAGGAGGGTGGAGGAATGGGAGGATGCTGTGGAGAAGCTGAGGCTAATTCGCCCTTCGCATCTTCAGGATGTGTTGAAGATAAGTTATGATGCTTTAGATGAAGAAGAGAAGTGTATATTCCTCGATATCGCTTGTTTGTTTGTACAAATGGGAATGAAGCGTGATGATGTGATTGATGTGTTAAGAGGTTGTGGTTTTAGGGGTGAGCTTGCTATCACGGTACTAGTGCAAAAATGCTTAATGAAAATCACTCAGGAGAATACTCTGTGGATGCATGATCAGATTCGAGACATGGGTAGGCAAATTGTTGTGGATGAAAGCCTTGTCGATCCTGGAAAGCGTAGTAGACTCTGGGATCGTGCCGAAATCATGCCTGTTTTGAAGGGTCACAAGGGAACTAGATCTGTTCAAGGTATTGTGCTAGATTTTGAGGAAGAAAGATTTCCTAAAAGCAAGGACGAATCAGTTTTTTGGAAGAAGCTTCAATGGAGACCGAGTTTAACAAATATATCAAGCTACATCAAACAATGCCTTAAGAACAATCTCGAACCTCAAGCAGAGAAAAACAAAGAGGTTATACTTCATACGAAATCCTTTGAACCAATGGTTAATCTGAGACAGCTTCAGATCAATAATCTGAAATTACAAGGCAAGTTTCTTCCAGCTGAACTGAAGTGGCTACAATGGCAAGGATGCCCTTTAGAACGCATGCCTTTGGAATCTTTGCCACGAGAATTGGCTGTTCTTGATCTCAAAAACAGCAAGAACATGGAAGCCTTGTGGGGATGGAATGGTTACAACAAGGTGCCAGAGAAGTTAATGGTCTTGAACCTCTCCCACTGCATCCGACTCACTGCTATACCTGATCTATCTGGCTGTGAATGTCTACTGAAGATTGATCTGGAGAACTGCATTAATCTAACTAATATTCATGAGTCAATTGGAAGTTTGAGTACCTTGCGTAGTTTAAATTTGACGCGTTGTTCAAGCCTTATCAACCTTCCCATTGATGTCTCAGGGCTAAAACAACTAGAGAGTCTTTTTCTTTCTGGTTGCTCCGAGATAAAAGCATTACCAGAAAACATCGGAATCCTGAAATCCTTGAAAGCACTTCATGCTAATGACACTGCTATAGCAGAGTTGCCCCAGTCCATTTTTCGCCTCACGAAACTTGAACGGCTTGTTTTAGAAGGTTGCCAAAATTTGAGAAGGCTACCTAGTTCTCTAGGACTTCTATGTTCTTTGCAAGAATTATCTCTATATAATTCTGGATTAGAAGAATTACCTGACTCTGTTGGATCATTAGAAAACCTTGAGACACTCAATTTGATGTGGTGTAAATCTCTCACTGTAATTCCTGATTCTGTAGGAAATCTCATGTCATTGACAGAACTTCTGATTGATAAAACTGCAATTAAAGAACTCCCTACTACCGTTGGTTTTTTATCTTACTTGAGGGAATTATCAGTTGGAAACTGTGTACTTCTCACTCAATTGCCAAAGTCAATTAAAAATTTGGCCTCAGTTGTTGATCTTCAGTTAGATGGAACAGCCGTCACCAATTTACCCGATGAGATTGGAGAAATGAAGCTACTGAGAAAACTTAATTTGATGAATTGTAAAAATCTGGAATATTTACCAGAATCTATTGGCCACCTAGCGTCTCTTACAAAATTGAACATGGTCAATGGAAATATCAAGGAATTGCCAGCATCCATTGGATGGCTAGAAAATCTTGTCAACTTAAGATTGAATAAATGTAGAATGCTCAGAAAGCTTCCAGCGTCTATAGGAAATTTGAAATCTCTACATCACTTTTTCATGGAGGAAACAGCTGTGTCAAGCTTACCTGAAAGCTTTGGGATGCTGTCAAGCTTGAGAACATTGAGAATGGCAAAGAGGCCCGATTTAGATTCCAATGCAAATAGCTTCCTTGCAGAACCTGAAGAAAACCATAACCCTTTTGTACTAACATCTTCCTTTTGCAATCTGACCTTGCTAACTGAACTTGATGCCCGTGCATGGAAAATATCTGGGAAAATTCCGGATGAATTTGAGAAGTTGTCACTTTTGGAGACTTTAAAATTTGGCATGAATGATTTTCACAGCCTGCCTTCCAGCTTGAAGGGCCTTTCTATTCTCAAGGTCCTTTCACTGCCAAACTGCACTCAGCTGAAGTCTCTCCCCTCACTTCCTTCAAGCCTGATTGAGCTGAATGTTCAAAACTGTTCTTCATTAGAAACTATCCATGACATGTCAAATTTAGAGAGCCTGCAGGAGTTGAATCTTACAAACTGTGTAAAAGTGGGGGATATTCCTGGTCTTGAAAGCTTGAAGTCCCTGAGAAGGTTGTATCTGAGTGGTTGCATTACATGCTCCTCACAAATACGCAAGAGACTTTCAAAGGTTGCACTGAAGAATATAAGGAACTTAAGCATGCCAGGAAGCAGGTTACCTGAATGGTTTTCTGGAGAAACTGTCAGCTTTTCCAAGCCTAAAAATCTTGATCTAAAAGGTGTACTTGTTGGTGTTATTATTTCAATCAACCATAAAATTGATATGCCAAACGTGAAGAGAGATGATATGCCTGGCTTGGTTGATGTTCAAGCAAATGTTCTCAAGGGGGGCAAAACTCTCTTTAGTACAGTGTTAAACATCCGTGGGGTGCCAAGGACAGATGAAGAACACATACACTTGTGTAGGTTCCATGATTACCATCAGGTGGTAGCCTTTTTAAAAGATTCTGATACATTATGTGTGAGCAAGAGAAATCCACCTTTTGATAAGGGGTTGGAGTTAAAAAAATGTGGGGTTCATTTAATCTTTGAAGGAGATGATGATTATGATGGAGGGGAAGAATCATTGGACAAAGGCCTAAAATCTGTCTCAGAAAAATTGGCCAATTTTTTCAGCACTCATGAAGGTGATGCTGGAGATGCTGAAACAGTTTCAACAGGAATCGAAGATGCTGGAACAGGAGCAACATCTTTTCTTACTACACTTAAACACAAATTCATTCTTCTGATTGGTCTATTCTTTTCTTTGTTATATGAGTTGGGGTTGCTAAGAAGAGATTGA 4275 0.4168 MSPESDLISATPGAFLLRWDVFLSFRGADTRDAITKGLHDCLQARGVRVFLDDVGLERGEEIKRGLMEAIDDSAAFIVIISQNYASSHWCLEELTKICDTSRLILPVFYRVDPSEVRHQSGPFGKSFESHEKRFEESEVLHWKKALKKVGGLAGFVFNHSEEDDLIRRLVQRVLKELSNTPLGVPEFAVGLDERVEKVMKVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNALVKRFEHRCFISNVRQVSSKQDGLVSLQSKIIKDLFPGAGSPSISDVNVGTSAIKGIVSEKRVLLVLDDVDDVQQIDALIGKREWFYDGSCVIITTRDTQILPQSHVSELYEVRELNDSQGLELFSYHALRRNKPPENLLRLSKEIVSLTGQMPLALEVFGSFLFGKRRVEEWEDAVEKLRLIRPSHLQDVLKISYDALDEEEKCIFLDIACLFVQMGMKRDDVIDVLRGCGFRGELAITVLVQKCLMKITQENTLWMHDQIRDMGRQIVVDESLVDPGKRSRLWDRAEIMPVLKGHKGTRSVQGIVLDFEEERFPKSKDESVFWKKLQWRPSLTNISSYIKQCLKNNLEPQAEKNKEVILHTKSFEPMVNLRQLQINNLKLQGKFLPAELKWLQWQGCPLERMPLESLPRELAVLDLKNSKNMEALWGWNGYNKVPEKLMVLNLSHCIRLTAIPDLSGCECLLKIDLENCINLTNIHESIGSLSTLRSLNLTRCSSLINLPIDVSGLKQLESLFLSGCSEIKALPENIGILKSLKALHANDTAIAELPQSIFRLTKLERLVLEGCQNLRRLPSSLGLLCSLQELSLYNSGLEELPDSVGSLENLETLNLMWCKSLTVIPDSVGNLMSLTELLIDKTAIKELPTTVGFLSYLRELSVGNCVLLTQLPKSIKNLASVVDLQLDGTAVTNLPDEIGEMKLLRKLNLMNCKNLEYLPESIGHLASLTKLNMVNGNIKELPASIGWLENLVNLRLNKCRMLRKLPASIGNLKSLHHFFMEETAVSSLPESFGMLSSLRTLRMAKRPDLDSNANSFLAEPEENHNPFVLTSSFCNLTLLTELDARAWKISGKIPDEFEKLSLLETLKFGMNDFHSLPSSLKGLSILKVLSLPNCTQLKSLPSLPSSLIELNVQNCSSLETIHDMSNLESLQELNLTNCVKVGDIPGLESLKSLRRLYLSGCITCSSQIRKRLSKVALKNIRNLSMPGSRLPEWFSGETVSFSKPKNLDLKGVLVGVIISINHKIDMPNVKRDDMPGLVDVQANVLKGGKTLFSTVLNIRGVPRTDEEHIHLCRFHDYHQVVAFLKDSDTLCVSKRNPPFDKGLELKKCGVHLIFEGDDDYDGGEESLDKGLKSVSEKLANFFSTHEGDAGDAETVSTGIEDAGTGATSFLTTLKHKFILLIGLFFSLLYELGLLRRD 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02480 1424 Gene3D Ribonuclease Inhibitor 1051 1257 IPR032675 -
Spst3g02480 1424 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 155 IPR035897 -
Spst3g02480 1424 Pfam TIR domain 19 180 IPR000157 GO:0007165
Spst3g02480 1424 Gene3D - 17 175 IPR035897 -
Spst3g02480 1424 SUPERFAMILY L domain-like 895 1226 - -
Spst3g02480 1424 Gene3D - 347 432 IPR042197 -
Spst3g02480 1424 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 179 - -
Spst3g02480 1424 PRINTS Disease resistance protein signature 211 226 - -
Spst3g02480 1424 PRINTS Disease resistance protein signature 714 730 - -
Spst3g02480 1424 PRINTS Disease resistance protein signature 289 303 - -
Spst3g02480 1424 PRINTS Disease resistance protein signature 382 396 - -
Spst3g02480 1424 Gene3D Ribonuclease Inhibitor 561 754 IPR032675 -
Spst3g02480 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Spst3g02480 1424 SUPERFAMILY L domain-like 489 916 - -
Spst3g02480 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 806 IPR044974 GO:0006952
Spst3g02480 1424 Pfam NB-ARC domain 193 413 IPR002182 GO:0043531
Spst3g02480 1424 Gene3D Ribonuclease Inhibitor 755 1050 IPR032675 -
Spst3g02480 1424 SMART LRR_typ_2 905 928 IPR003591 -
Spst3g02480 1424 SMART LRR_typ_2 811 834 IPR003591 -
Spst3g02480 1424 SMART LRR_typ_2 764 787 IPR003591 -
Spst3g02480 1424 SMART LRR_typ_2 952 975 IPR003591 -
Spst3g02480 1424 SMART LRR_typ_2 1087 1109 IPR003591 -
Spst3g02480 1424 SMART LRR_CC_2 692 719 IPR006553 -
Spst3g02480 1424 SMART LRR_CC_2 881 908 IPR006553 -
Spst3g02480 1424 SMART LRR_CC_2 1154 1183 IPR006553 -
Spst3g02480 1424 SMART LRR_CC_2 928 955 IPR006553 -
Spst3g02480 1424 SMART LRR_CC_2 834 861 IPR006553 -
Spst3g02480 1424 Gene3D - 176 342 IPR027417 -
Spst3g02480 1424 SMART till_3 18 152 IPR000157 GO:0007165
Spst3g02480 1424 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02480 Spst-Chr3 72546509 72552836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02480 19 887 WRKY Transcription Factor Family AT4G12020 29.007 8.88e-86 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02480 - - gmx:100786934 2172.9