Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02465 ATGGGAAGAGAAGAGTTGGGGGAGAAAGAAAGCTACCACTGGCAGATTCGGTGTTATTGGACTCGTCCATACAACCCCTTCCGCAGCCACGTGCAGAGAGTCAAACCCAACCCTCTCCTTTTCTCTCCAAACCCAACAAAAAACACAACTTTTCTCCACCCCATAACAACACAAAAGGCAAACTTTTCCGCTCACAATTCGGCTGAATTTTGGACCGAGATGGGTGCAGGGGACTACTACAAGATCCTCAAGGTGAACCGCAATGCCACGGATGAAGAACTCAAGAGGGCATATAAGAGGTTGGCCATGAAGTGGCACCCAGACAAGAACCATCAGCACCACCCTGTTACGAAAGAAGAAGCTGAGGCCAAGTTCAAACAGGTTTCGGAGGCTTATGATGTTCTCAGTGACCCCAAGAAGCGCCAGATCTATGATTTCTATGGCCACTATCCCTTGAACTCTATGAAGGTGAATGAGGAGAACGGTGATGGGGATGTTAGGGTCCCCAAGAGCGAGAAAGTTGGAGTGGTTGAGAGCAAATTGGTGTGCACCCTTGAGGAACTTTTCAAAGGTTGCAGAAAGAAATTGAAGATCTCAAGGACGGTTCCTGACGAATTCGGTAAGTTGAAGACTGTGGAAGAGGTGTTGAAAATAGATATCAAACCTGGTTGGAAGAAAGGCACAAAAATAACATTTCCTGGGAAAGGCAACCAAGAAGCAGGAGCTAGTGCCCCTGATGATCTAATCTTTGTGGTGGATGAGAAACCACATGCTTTATTCAAGAGGAATGGAAATGATTTGGTTGTGACACACAAAATCTTACTTGTGGAGGCTCTAGTGGGAAAGACTCTCAACTTGACAACCTTGGATGGAAGAGAGCTGACAGTTCAAGTGACAGATATTGTGAGACCAAAATTTGTGTTGGTGGTTCCAAATGAAGGAATGCCCATCTCAAAGGAACCTGGCAAGAAAGGAAACTTGAGAATCAAGTTTGATGTTATGTTCCCATCAAGGCTTACCACACCGCAGAAGCATGAGCTGAAAAGGATTTTGAGCAACACTGATGACTAA 1071 0.4556 MGREELGEKESYHWQIRCYWTRPYNPFRSHVQRVKPNPLLFSPNPTKNTTFLHPITTQKANFSAHNSAEFWTEMGAGDYYKILKVNRNATDEELKRAYKRLAMKWHPDKNHQHHPVTKEEAEAKFKQVSEAYDVLSDPKKRQIYDFYGHYPLNSMKVNEENGDGDVRVPKSEKVGVVESKLVCTLEELFKGCRKKLKISRTVPDEFGKLKTVEEVLKIDIKPGWKKGTKITFPGKGNQEAGASAPDDLIFVVDEKPHALFKRNGNDLVVTHKILLVEALVGKTLNLTTLDGRELTVQVTDIVRPKFVLVVPNEGMPISKEPGKKGNLRIKFDVMFPSRLTTPQKHELKRILSNTDD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02465 356 CDD DnaJ_C 177 339 - -
Spst3g02465 356 CDD DnaJ 78 137 IPR001623 -
Spst3g02465 356 SUPERFAMILY Chaperone J-domain 74 153 IPR036869 -
Spst3g02465 356 FunFam DnaJ-like subfamily B member 13 75 170 - -
Spst3g02465 356 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 74 351 - -
Spst3g02465 356 SUPERFAMILY HSP40/DnaJ peptide-binding domain 260 345 IPR008971 GO:0006457|GO:0051082
Spst3g02465 356 FunFam Dnaj homolog subfamily b member 173 255 - -
Spst3g02465 356 Pfam DnaJ C terminal domain 177 336 IPR002939 -
Spst3g02465 356 Gene3D DnaJ domain 65 167 IPR036869 -
Spst3g02465 356 Pfam DnaJ domain 78 145 IPR001623 -
Spst3g02465 356 ProSiteProfiles dnaJ domain profile. 78 148 IPR001623 -
Spst3g02465 356 FunFam DNAJ heat shock family protein 256 351 - -
Spst3g02465 356 PRINTS DnaJ domain signature 140 159 IPR001623 -
Spst3g02465 356 PRINTS DnaJ domain signature 98 113 IPR001623 -
Spst3g02465 356 PRINTS DnaJ domain signature 80 98 IPR001623 -
Spst3g02465 356 PRINTS DnaJ domain signature 120 140 IPR001623 -
Spst3g02465 356 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Spst3g02465 356 SMART dnaj_3 77 140 IPR001623 -
Spst3g02465 356 Gene3D - 175 255 - -
Spst3g02465 356 Gene3D - 257 337 - -
Spst3g02465 356 SUPERFAMILY HSP40/DnaJ peptide-binding domain 179 257 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02465 Spst-Chr3 72360352 72363347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02465 79 145 C2H2 Transcription Factor Family AT1G74250 38.806 8.37e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02465 K09510 - gmx:100786068 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02465 3 72360352 72363347 Spst2g01530 2 13991240 13993187 PCT