Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02441 TATTCTATGGAAGTTAACCAGAGTGAAGAAATCAGTGGCAACAAGGATCATAAGCTTAAAAGGGAAATGGGAGACGTTGGAGAAGGAAATGATAACTTGAAACTTTCATTGGCAAGGCTTGTAAAGGATTCAACTAGTGATGAAGAAAGTGAACTTGTTTCCCTTTCTCTTGGAATTTCATCTACAGGTAAACATGATAAGAAGAATATAACTGAAAAGATCATAGAAAATGAGGATTTGAAAGAGGGACTTTCACTTGGGTTAGATATAAGATTTGACCCTTCAGCTATAAACAATCACAGCAGCGAAGGTATTTGCGATGAGGAAAAGGAACTCAGAGCGACATGGCCACCCAGTAAAGTTCTCAAAGCAATGAGAACTTGGGATAAGAGTGAAGCTTCTCAACATGCTGAAGTCAAGAAGGCTAGGATGAATGATGGTTGTCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGGAATCCATGCCCCCGAGCTTACTATCGATGTACTCTCTCTCCATCCTGTCCTGTGAAAAAACAGGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTATGAAGGAACTCACAACCACCCTCTTCCTACTTCAGCCACTACCATTGCATACACAACTTCTGCTGCTGCTTCCATGCTCCAGTCTCCCTCATTGAGCACACAACTAGGACTAGCCAATTCAGATACTGTCCCTCTCATCAATTCTAGTGTTCCTTATAACCTTAATGCCCTAAACTTCTCATCAAGCCATCACCACTTTTCAAAATCACCACACTTACACTTCCACAATTCATCTATTTCTACCTCTAATTCTCACCCCACAGTCACTCTTGACCTTACCACTCCTCAAACTTCACCTCACATTGGAAAGTTCACCCCAAGCTTGTCTTTCATACCAAATTATTCATCAACCAATAATGTTAATTTTTCCTCGAGTACTTTCTCTCCTTTGCAATCTAGTATGCTACACTTACCTTGTTATGGTGATTACTTCAACTATGAGGGATTGGTTACCCCAAATAGAAACCAAAATGGTTCCCTTGTGCTCACCGGAAAACAACCATTCCAGGGGCATCTTTATCAATCTAATCACATTAGCGACCATGCCATTGCTAAACAACCTTTACCTGATTCCATTATTTCTGCAACCAAGGCAATCACTGCTTCCCCAAAATTTCAATCTGCAATATTAGCAGCTGCCCTCACAGCTTATGCTGTTAATGGGGTAAGAGAAAATCATGATGGGGCTCAGAGTGCAGGTTTGGACTTAAATCTAGGTGGAGATATGCCATACACAACGAACACAGTTTGCCCTAATTATAATGCGTCAAGGTACAAGAGAATGTTATTTTCTGCACCTAGTGCTCAGAAAAGAAACTCAGTCATATTTCAGCCATCACATACATCTAGAAGTTCCTTTGGATCCTCCTCAAGTAAAAGTAAATATTCTTAG 1479 0.403 YSMEVNQSEEISGNKDHKLKREMGDVGEGNDNLKLSLARLVKDSTSDEESELVSLSLGISSTGKHDKKNITEKIIENEDLKEGLSLGLDIRFDPSAINNHSSEGICDEEKELRATWPPSKVLKAMRTWDKSEASQHAEVKKARMNDGCQWRKYGQKIAKGNPCPRAYYRCTLSPSCPVKKQVQRCAEDMSILITTYEGTHNHPLPTSATTIAYTTSAAASMLQSPSLSTQLGLANSDTVPLINSSVPYNLNALNFSSSHHHFSKSPHLHFHNSSISTSNSHPTVTLDLTTPQTSPHIGKFTPSLSFIPNYSSTNNVNFSSSTFSPLQSSMLHLPCYGDYFNYEGLVTPNRNQNGSLVLTGKQPFQGHLYQSNHISDHAIAKQPLPDSIISATKAITASPKFQSAILAAALTAYAVNGVRENHDGAQSAGLDLNLGGDMPYTTNTVCPNYNASRYKRMLFSAPSAQKRNSVIFQPSHTSRSSFGSSSSKSKYS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02441 492 Gene3D WRKY domain 130 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02441 492 ProSiteProfiles WRKY domain profile. 139 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02441 492 MobiDBLite consensus disorder prediction 10 28 - -
Spst3g02441 492 MobiDBLite consensus disorder prediction 470 492 - -
Spst3g02441 492 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02441 492 Pfam WRKY DNA -binding domain 145 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02441 492 MobiDBLite consensus disorder prediction 1 28 - -
Spst3g02441 492 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 414 IPR044810 GO:0003700
Spst3g02441 492 SUPERFAMILY WRKY DNA-binding domain 141 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02441 Spst-Chr3 69962979 69967192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02441 44 420 WRKY Transcription Factor Family AT5G15130 38.995 1.08e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g02441 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02441 - - vum:124844927 690.649