Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02424 ATGAAGAACTTGAGGTTTTGCTTCAGTTATTTGTTTCCTGCAATCATTCTTGCTCTGCTTACTCCTTCCTCAGTTGCACAGCTATCACCAAGTGAGAATAGAATTCTATTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGCTCTCCAAGGGTGGACAAGATGGACCAACTTGTGCTTCCTCCCTCCATCACGTTCCCTCAAGATAGTTTGTTCAAACGGTCATGTGACAGAACTAACAATCATTGGAAACAAGACCTCCCCATCGTCTCACATCCCCAAGGCAGGTTCCTGGACTTCCCTTCAAACACTTTCCGGAAAATTCTCTATCGATTCTTTCTTCACTGACCTGACAAAGCTTTCAAATTTGAAGGTGTTGTCCTTAGTGTCCTTGGGTTTGTGGGGTCCTTTACCATCCAAAATTAACAGGTTTTGGTCTTTGGAAGTGCTAAACATTAGCTCAAATTTCATTTATGGAGAAATTCCGTCATCTATATCCTCAATGATGAATCTGAGGAGTCTTGTTTTGGTTGGTAATCTCTTCAATGGAAGTGTCCCTGATCTCCAACGGTTAACTTCTCTTCAAGAGCTCAACTTGGGAGGTAACAAACTGGGTCCTGGATTCCCATCAGTTGGAAAGAATCTTGTCACTATTATCTTGAGAAGTAATTCATTGAGATCTCATATTCCTCCACAAATTCTGCACTTTGACAAACTTAAGGTATTTGATGTCTCTTCCAATGAATTTTTTGGAAACATTCCATCCTTTTTGATGTCTATGCCTTCCCTTCAGTACCTAAACTTGGCCTCAAACCATCTAAGTGGTAACCTCTCAGTGAATGTGGCATGTAGCTCCTCACTAACATTTGTGGATATCTCTCACAACCTTCTGGTTGGAAAATTGCCATCCTGCTTTGGTTCAATGTCTTCAAAGGCCACACTACTATATTCTGGAAATTGTTTGTCAACCAAATGGTTAAAAAATCAACAACATCCATCTTCTTTTTGCAAGAGAGAGGGGGCGTTGGCTGTTATGCCTCCAGCTAAAAACCTGAAGAATGAATCAAATTCGGGTGCGAAACTAGGCTCAGTGATTGGAATAATTGGAGGAGCTGTAGTAATTGCTGGGCTTCTGGTTCTTCTCATTTTGATCATCTTTAGAAAGTCCAGTGGAGAAAGATCACATCATAAAATGGACAAACCAGTTGCTAATAAATATTCTGCCAGTGCATCTCCTAGATCAAACGGTACAAGACATATTCCTCAGGCAATGAAGCAAGCTGCACTTGGACTGCCACCGTACCGCATTTTCACATCAGAGGAAATTGATGATGCAACAAACAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACAGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTAGTTAGTTGTGTTAAAATAAAGCAGAAAGGTTTGCCCCACAGCATCATGCAGCAAATAGAGGTATTATCCAATTTGAGGCACAGGCATATGGTGAGTGTTCTAGGACACTGTATCATTGCTGAACAGGATCATCCCCAAACAACAAGCACTGTCTTCATTGTATTTGAGCACATCTCTAATGTGTCATTAAGGGATCAACTTGCAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATGAACATAGGCATTGCAAGAGGAGTCCAGTTCTTACACACAGGAGTTGCTCCTGGTATATATGGCAACAATCTGAAGATTGAGAACATTTTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATATAGAATCCCATTGCCATCCAAGAGTGTGCATAATGAACACACTGCCACCAATCATAGCACAAATAATGCAGAAAAGGAAGACATCTATCAGCTGGGTGTTATTCTTCTTGAAGTTATCACTGGCAAACAAATTGCTTCCTCGAGTGAAATAGAGGAGATGAAGGATGAGCTGGAGAATGGTTCATCAGAAGCAACATCGGTACTTAAGAGCGAAATTGATCCTTCACTGCGGGGAACTTATGCATATGAATCAATGAAGACTGCAGTTCAGATTACCATCAACTGTCTCTCCAAAGTTTCCAGCCAGCGCCCTTCAATAGAGGATGTTCTTTGGAATTTACAATACTCAATGCAAGTTCAAGAGTCATGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2205 0.4118 MKNLRFCFSYLFPAIILALLTPSSVAQLSPSENRILFQVQKLLEYPQALQGWTRWTNLCFLPPSRSLKIVCSNGHVTELTIIGNKTSPSSHIPKAGSWTSLQTLSGKFSIDSFFTDLTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPSSISSMMNLRSLVLVGNLFNGSVPDLQRLTSLQELNLGGNKLGPGFPSVGKNLVTIILRSNSLRSHIPPQILHFDKLKVFDVSSNEFFGNIPSFLMSMPSLQYLNLASNHLSGNLSVNVACSSSLTFVDISHNLLVGKLPSCFGSMSSKATLLYSGNCLSTKWLKNQQHPSSFCKREGALAVMPPAKNLKNESNSGAKLGSVIGIIGGAVVIAGLLVLLILIIFRKSSGERSHHKMDKPVANKYSASASPRSNGTRHIPQAMKQAALGLPPYRIFTSEEIDDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVSCVKIKQKGLPHSIMQQIEVLSNLRHRHMVSVLGHCIIAEQDHPQTTSTVFIVFEHISNVSLRDQLADGRKREMLKWPQRMAMNIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYRIPLPSKSVHNEHTATNHSTNNAEKEDIYQLGVILLEVITGKQIASSSEIEEMKDELENGSSEATSVLKSEIDPSLRGTYAYESMKTAVQITINCLSKVSSQRPSIEDVLWNLQYSMQVQESWTSSGNLSTKL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02424 734 ProSiteProfiles Protein kinase domain profile. 449 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02424 734 SUPERFAMILY Protein kinase-like (PK-like) 430 714 IPR011009 -
Spst3g02424 734 Gene3D Transferase(Phosphotransferase) domain 1 533 729 - -
Spst3g02424 734 Gene3D Ribonuclease Inhibitor 29 213 IPR032675 -
Spst3g02424 734 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 211 - -
Spst3g02424 734 SUPERFAMILY L domain-like 29 322 - -
Spst3g02424 734 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515
Spst3g02424 734 Gene3D Ribonuclease Inhibitor 214 340 IPR032675 -
Spst3g02424 734 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 533 730 - -
Spst3g02424 734 Gene3D Phosphorylase Kinase; domain 1 413 520 - -
Spst3g02424 734 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 214 715 - -
Spst3g02424 734 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 212 301 - -
Spst3g02424 734 Pfam Protein kinase domain 455 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02424 734 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 422 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02424 Spst-Chr3 68939152 68942177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02424 24 655 Miscellaneous Gene Families AT2G02780 49.235 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Spst3g02424 Pkinase 1.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02424 - - gmx:100803061 1236.09