Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02422 ATGGAGAGGAAAGGGAGAGGAGCACCACCCTCGACGGCGGCGCGTCCCAGGAATAATATCCGATCACACGCTTCCACGGAGGGAGTTTTCAACGGCGGGGCCACCGTGGGGTATAGCCCTGGTCCCATGACTCTACTTTCCAACTTATTCGGCGATGGCGATGAGTGTAAGTCGTTCTCGGAGCTCCTCGCCGGCGCCATAGTGGACCCCACCCCACCCCAGTTCTTTCTTGATTCACCTTCTCAGGGACACTTTGGAATGACAGACCAGCAAATGCTAGCACAGGTCACACACTCCAATGTGCAAATCCAAGCTGAACATCCATTCTCCACAGCAGTGCCTGCTACCACATTGACACAGTTTCACTCTCCATCTGTCAATGCTGATAAGCCTAATGAAGATGGATATAACTGGAGGAAGTATGGGCAGAAACATGTCAAGGGTAGTGACTTTTCTCGAAGTTATTACAAATGCACACATCCAAATTGTCCTGTCAAGAAAAAGCTTGAACGATCTCTTGGGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCCACGTCCTCATCCCAGTAAGACCACAAGAGGTACCCTAACTTCAACTGAAAATTCAGATAAGTCGAAAGAAGAGATGAGTTCTCAGATGGATCTAGAATCTAGTCAGGCAACAGCTGAACATGGGTCGGGGACAAGTGATAGTGATCATGAGACTGAAGTGGATGAGAAAAATGATGAACCTGATCGCAAGAGGAGAAACACAGAAGCCAGACACCAGGATCCAGACTCTTTGCATAGAACTGTGGCAGAACCTAGAATCGTTGTGCAGACAACAAGTGAAGTGGATCTCTTGGATGATGGATATAGATGGCGTAAATATGGACAAAAAGTTGTCAAAGGCAACCCATACCCAAGGAGCTATTACAAGTGCACAACCCCAGGTTGCAATGTTCGAAAGCATGTTGAGAGGGCTTCAACTGATCCTAAAGCTGTCATAACAACGTATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAGAACTAATAGCCACACACTTGCCAACAATAATGCATCACAGCTGAAAGAACAAAATGCCACACCCAATGAGACGCATCGTTTCAGCAGCAGGGGTGTTGGGGGTTATGAACAGCGACCTGTGGAAAATCTAAGATTGAAGGAAGAGCATATAACTTAG 1203 0.4672 MERKGRGAPPSTAARPRNNIRSHASTEGVFNGGATVGYSPGPMTLLSNLFGDGDECKSFSELLAGAIVDPTPPQFFLDSPSQGHFGMTDQQMLAQVTHSNVQIQAEHPFSTAVPATTLTQFHSPSVNADKPNEDGYNWRKYGQKHVKGSDFSRSYYKCTHPNCPVKKKLERSLGGHVTAIIYKGEHNHPRPHPSKTTRGTLTSTENSDKSKEEMSSQMDLESSQATAEHGSGTSDSDHETEVDEKNDEPDRKRRNTEARHQDPDSLHRTVAEPRIVVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARTNSHTLANNNASQLKEQNATPNETHRFSSRGVGGYEQRPVENLRLKEEHIT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02422 400 Pfam WRKY DNA -binding domain 287 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 Pfam WRKY DNA -binding domain 133 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 SMART WRKY_cls 132 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 SMART WRKY_cls 286 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 ProSiteProfiles WRKY domain profile. 127 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 MobiDBLite consensus disorder prediction 232 269 - -
Spst3g02422 400 MobiDBLite consensus disorder prediction 361 376 - -
Spst3g02422 400 MobiDBLite consensus disorder prediction 182 272 - -
Spst3g02422 400 SUPERFAMILY WRKY DNA-binding domain 130 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 FunFam WRKY transcription factor 33 273 339 - -
Spst3g02422 400 Gene3D WRKY domain 271 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 Gene3D WRKY domain 119 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 MobiDBLite consensus disorder prediction 217 231 - -
Spst3g02422 400 MobiDBLite consensus disorder prediction 361 400 - -
Spst3g02422 400 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 367 IPR044810 GO:0003700
Spst3g02422 400 ProSiteProfiles WRKY domain profile. 281 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02422 400 FunFam WRKY transcription factor 121 192 - -
Spst3g02422 400 MobiDBLite consensus disorder prediction 1 28 - -
Spst3g02422 400 SUPERFAMILY WRKY DNA-binding domain 278 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02422 Spst-Chr3 68828253 68830486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02422 13 63 WRKY Transcription Factor Family AT2G03340 54.902 3.21e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g02422 WRKY 9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02422 - - vun:114179749 588.571